Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000697.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 91.26 | 79.42 |
| CDX90742 | Canola | cytosol | 91.52 | 78.94 |
| CDY05081 | Canola | cytosol | 91.52 | 78.07 |
| Solyc06g064650.2.1 | Tomato | endoplasmic reticulum | 60.67 | 73.29 |
| VIT_18s0001g06750.t01 | Wine grape | endoplasmic reticulum | 64.27 | 70.62 |
| KRH77685 | Soybean | endoplasmic reticulum | 60.67 | 66.48 |
| GSMUA_Achr7P02980_001 | Banana | endoplasmic reticulum, golgi | 56.56 | 63.58 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 57.58 | 62.57 |
| KRH27806 | Soybean | nucleus | 59.13 | 62.5 |
| Os03t0842900-01 | Rice | plastid | 53.73 | 58.87 |
| KXG37163 | Sorghum | endoplasmic reticulum | 55.53 | 56.69 |
| Zm00001d034801_P001 | Maize | peroxisome | 35.99 | 54.05 |
| HORVU5Hr1G120110.2 | Barley | endoplasmic reticulum, vacuole | 50.64 | 52.25 |
| TraesCS5D01G529200.1 | Wheat | endoplasmic reticulum, vacuole | 51.41 | 51.68 |
| TraesCS4A01G343700.1 | Wheat | endoplasmic reticulum, vacuole | 51.41 | 51.41 |
| TraesCS5B01G530500.1 | Wheat | endoplasmic reticulum | 50.13 | 50.39 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 37.79 | 42.12 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 37.79 | 42.12 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 28.79 | 37.46 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 28.79 | 37.46 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 32.65 | 37.13 |
| AT3G47360.1 | Thale cress | endoplasmic reticulum | 29.05 | 36.57 |
| AT3G47350.2 | Thale cress | endoplasmic reticulum | 29.05 | 35.2 |
| AT3G03330.1 | Thale cress | golgi | 17.99 | 21.34 |
| AT3G03350.2 | Thale cress | vacuole | 11.05 | 11.5 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | EntrezGene:826593 | UniProt:A0A178UUF0 | ProteinID:AEE82830.1 | ArrayExpress:AT4G10020 |
| EnsemblPlantsGene:AT4G10020 | RefSeq:AT4G10020 | TAIR:AT4G10020 | RefSeq:AT4G10020-TAIR-G | EnsemblPlants:AT4G10020.1 | TAIR:AT4G10020.1 |
| Unigene:At.48839 | Symbol:AtHSD5 | EMBL:BT004103 | ProteinID:CAB39626.1 | ProteinID:CAB78125.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_192740.1 | ProteinID:OAO97626.1 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
| PANTHER:PTHR43391 | PANTHER:PTHR43391:SF14 | UniProt:Q9T0G0 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| TMHMM:TMhelix | UniParc:UPI000004891B | SEG:seg | : | : | : |
Description
HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
Coordinates
chr4:+:6268273..6270434
Molecular Weight (calculated)
43444.1 Da
IEP (calculated)
6.890
GRAVY (calculated)
-0.072
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.