Factsheet for Bra000697.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90742	Canola	cytosol	99.33	98.45
CDY05081	Canola	cytosol	98.43	96.49
AT4G10020.1	Thale cress	endoplasmic reticulum	79.42	91.26
Solyc06g064650.2.1	Tomato	endoplasmic reticulum	52.8	73.29
VIT_18s0001g06750.t01	Wine grape	endoplasmic reticulum	54.81	69.21
KRH77685	Soybean	endoplasmic reticulum	52.8	66.48
KRH27806	Soybean	nucleus	51.45	62.5
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	48.32	62.43
GSMUA_AchrUn_...	Banana	extracellular, golgi	49.66	62.01
Os03t0842900-01	Rice	plastid	46.09	58.03
KXG37163	Sorghum	endoplasmic reticulum	47.65	55.91
Zm00001d034801_P001	Maize	peroxisome	29.98	51.74
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	43.18	51.19
TraesCS5D01G529200.1	Wheat	endoplasmic reticulum, vacuole	43.85	50.65
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	44.07	50.64
TraesCS5B01G530500.1	Wheat	endoplasmic reticulum	42.73	49.35
Bra000626.1-P	Field mustard	endoplasmic reticulum, extracellular	30.87	40.47
Bra022523.1-P	Field mustard	endoplasmic reticulum, extracellular	31.32	40.11
Bra012757.1-P	Field mustard	extracellular, golgi	27.52	39.81
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.07	38.91
Bra041076.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	24.83	37.12
Bra033794.1-P	Field mustard	endoplasmic reticulum, plasma membrane	22.6	35.82
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	16.11	21.95
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	14.32	17.88

Protein Annotations

EnsemblPlants:Bra000697.1	EnsemblPlants:Bra000697.1-P	EnsemblPlantsGene:Bra000697	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR43391	PANTHER:PTHR43391:SF14	PFAM:PF00106	PRINTS:PR01217	ScanProsite:PS00061
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002540300	UniProt:M4C919	MapMan:5.9.4	:

Description

AT4G10020 (E=2e-194) AtHSD5 | AtHSD5 (hydroxysteroid dehydrogenase 5); binding / catalytic/ oxidoreductase

Coordinates

chrA03:+:12532789..12534963

Molecular Weight (calculated)

50203.6 Da

IEP (calculated)

7.158

GRAVY (calculated)

-0.293

Length

447 amino acids

Sequence
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFSWPLLCF ISFSERLYNS YFVTEDMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NNARQIGANH
101: VIIIAADVVK EDDCRRFITQ AVNYYGRVDH LVNSASLGHT FYFDEVSDTT VFPHLLDINF WGNVYPTYVA LPHLQKTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSRGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS SEGSRQSSLV GVGQGMPVEE SSSQMKLMLE GGSPRVSASP PHYTASPPRY TPSPSPPHHT SSPQRYTPSP SPPHYTSSRH RYTPSPSPPR
401: YTESPPLYTE SPPHYTTSPN WYAESPPRYT PSPSPPRFSR FNIQELP

Best Arabidopsis Sequence Match ( AT4G10020.1 )
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL

Arabidopsis Description

HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.