Factsheet for Solyc06g064650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g06750.t01	Wine grape	endoplasmic reticulum	79.19	72.03
KRH77685	Soybean	endoplasmic reticulum	72.67	65.92
KRH27806	Soybean	nucleus	73.29	64.13
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	67.08	62.43
GSMUA_AchrUn_...	Banana	extracellular, golgi	67.7	60.89
AT4G10020.1	Thale cress	endoplasmic reticulum	73.29	60.67
Os03t0842900-01	Rice	plastid	61.49	55.77
KXG37163	Sorghum	endoplasmic reticulum	63.98	54.07
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	73.29	52.8
CDX90742	Canola	cytosol	73.6	52.55
CDY05081	Canola	cytosol	73.29	51.75
Zm00001d034801_P001	Maize	peroxisome	40.37	50.19
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	57.14	48.81
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	58.07	48.07
TraesCS5D01G529200.1	Wheat	endoplasmic reticulum, vacuole	57.45	47.8
TraesCS5B01G530500.1	Wheat	endoplasmic reticulum	56.52	47.03
Solyc06g072670.2.1	Tomato	endoplasmic reticulum, extracellular, golgi	43.48	40.11
Solyc03g097440.2.1	Tomato	plastid	43.79	40.06
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	40.06	36.54
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	20.19	20.44

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	UniProt:K4C795
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391
PANTHER:PTHR43391:SF14	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:Solyc06g064650.2	EnsemblPlants:Solyc06g064650.2.1
TMHMM:TMhelix	UniParc:UPI0002766F01	:	:	:	:

Description

11-beta-hydroxysteroid dehydrogenase-like 5 [Source:Projected from Arabidopsis thaliana (AT4G10020) UniProtKB/Swiss-Prot;Acc:Q9T0G0]

Coordinates

chr6:-:40293086..40295767

Molecular Weight (calculated)

36332.7 Da

IEP (calculated)

5.719

GRAVY (calculated)

0.095

Length

322 amino acids

Sequence
(BLAST)

001: MMDLVNSVLN FVVPPASLVM LAFSWPALYF INTCERMYNS FFGEDMEDKI VIITGASSGI GEQIAYEYAK KKAHLVLVAR RETRLWGISE NARALGAKSV
101: VITAADVVKE ADCRRFITET VNLYGRVDHL VNTASLGHTF YLEEATDTNV FPILMDINFW GNVYPTYVAL PYLRQSRGRV IVNASVESWL PLPRMSLYAA
201: AKAALVNFYE TLRFEVDGDV GVTIATHGWI GTEMTGGRFM LEEGAEMQWK EEREVHASGS SVEDFAKLIV SGACRGDPYV KYPSWYDIFL LYRVFTPNVL
301: QWTFRLLLSN QSVRKTSLIA YS

Best Arabidopsis Sequence Match ( AT4G10020.1 )
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL

Arabidopsis Description

HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.