Factsheet for GSMUA_Achr7P02980_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular, golgi	83.81	81.01
Solyc06g064650.2.1	Tomato	endoplasmic reticulum	62.43	67.08
VIT_18s0001g06750.t01	Wine grape	endoplasmic reticulum	66.47	64.97
KRH77685	Soybean	endoplasmic reticulum	63.58	61.97
Os03t0842900-01	Rice	plastid	63.58	61.97
KRH27806	Soybean	nucleus	63.29	59.51
KXG37163	Sorghum	endoplasmic reticulum	63.58	57.74
AT4G10020.1	Thale cress	endoplasmic reticulum	63.58	56.56
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	59.83	54.91
TraesCS5D01G529200.1	Wheat	endoplasmic reticulum, vacuole	60.98	54.52
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	60.69	53.98
TraesCS5B01G530500.1	Wheat	endoplasmic reticulum	59.25	52.97
Zm00001d034801_P001	Maize	peroxisome	36.71	49.03
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	62.43	48.32
CDX90742	Canola	cytosol	62.14	47.67
CDY05081	Canola	cytosol	62.43	47.37
GSMUA_Achr6P12220_001	Banana	endoplasmic reticulum, plasma membrane	39.88	38.98
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	21.68	20.83

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G02980_001
EnsemblPlants:GSMUA_Achr7P02980_001	EnsemblPlants:GSMUA_Achr7T02980_001	UniProt:M0TE88	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF14	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
TMHMM:TMhelix	UniParc:UPI000295221C	:	:	:	:

Description

oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G02980_001]

Coordinates

chr7:+:2386255..2389829

Molecular Weight (calculated)

39434.5 Da

IEP (calculated)

6.921

GRAVY (calculated)

-0.043

Length

346 amino acids

Sequence
(BLAST)

001: MDLLNAVLNS VVPPASMIIL AFAWPTISFL HALEWFFKTL YRENMENKVV LITGASSAIG EQLAYEYARR KANLVLVARR ENRLWGIREN ARLLGAKHVL
101: VMAADVVKEE ECRRFISDTI SYFGHLHHLV NTASLGHNFY FEEATDPAVF PHMMDINFWG NVYPTYVALP YLRQTRGRIL VDASMESWLP MPRMSLYAAA
201: KAAVVNFYET LRFELEEDVG ITIATHGWIG SDVSRGRFML EEGAEMQWKE DREVRLAGGH VEEFAKLMVA DVCRGYAHAK HPSWYDVFLL YRVFAPDILG
301: WAFRLLLPND DRAKPTSGRL FPEASSPRKP IAAFSSASPR RLSEVE

Best Arabidopsis Sequence Match ( AT4G10020.1 )
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL

Arabidopsis Description

HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.