Factsheet for Bra031995.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43128	Canola	extracellular, golgi, vacuole	99.09	99.09
CDY50699	Canola	extracellular, golgi, vacuole	98.17	98.17
AT3G03330.1	Thale cress	golgi	90.24	90.24
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	69.21	71.38
KRH00954	Soybean	endoplasmic reticulum	67.07	68.97
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	64.94	66.98
Os11t0265400-01	Rice	plasma membrane	64.94	64.94
TraesCS4D01G081900.1	Wheat	vacuole	64.63	64.83
TraesCS4B01G084000.1	Wheat	vacuole	64.63	64.83
TraesCS4A01G232000.1	Wheat	vacuole	64.33	64.53
KXG28278	Sorghum	endoplasmic reticulum	64.33	63.75
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	35.37	61.38
KRH40271	Soybean	vacuole	57.32	59.87
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	64.63	59.22
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	64.33	58.61
Zm00001d004616_P008	Maize	endoplasmic reticulum, golgi	63.41	58.26
HORVU4Hr1G014360.2	Barley	mitochondrion	56.4	47.56
Bra012757.1-P	Field mustard	extracellular, golgi	26.22	27.83
Bra041076.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	24.7	27.09
Bra033794.1-P	Field mustard	endoplasmic reticulum, plasma membrane	22.87	26.6
Bra022523.1-P	Field mustard	endoplasmic reticulum, extracellular	25.61	24.07
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	22.26	23.47
Bra000626.1-P	Field mustard	endoplasmic reticulum, extracellular	24.39	23.46
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	21.95	16.11

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra031995	EnsemblPlants:Bra031995.1	EnsemblPlants:Bra031995.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	UniProt:M4ET65	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR45274	InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002546333	SEG:seg	:	:

Description

AT3G03330 (E=1e-153) | short-chain dehydrogenase/reductase (SDR) family protein

Coordinates

chrA02:-:26740981..26743104

Molecular Weight (calculated)

35688.5 Da

IEP (calculated)

9.912

GRAVY (calculated)

0.001

Length

328 amino acids

Sequence
(BLAST)

001: MLTLLFSSLG LLLLLGLLLK FAFADGDLTL ISKKHVKREA IEGKVVWITG ASRGIGEVLA KQFASLGAKL ILSARNETEL VRVKSELKGK YAPEDVKVLP
101: LDLASGEEGL KGAVERAVSL FPGAGVDYLV HNAAYERPKS NAVDASEENL KTTFEVNVFG TISLTKLVTP HMLKQGGGHF VVISSAAGKV PSPGQAIYAA
201: SKHALQGYFH TLRSEFFQKG IKVTVVCPGP IETSNGTGTS TSEDKKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP FLGFWLMDKV
301: GGKRVEVAEK KGNTYSWNLL FQKKTKTN

Best Arabidopsis Sequence Match ( AT3G03330.1 )
(BLAST)

001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN

Arabidopsis Description

At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.