Factsheet for Zm00001d004616_P008

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28278	Sorghum	endoplasmic reticulum	86.27	93.05
TraesCS4D01G081900.1	Wheat	vacuole	74.51	81.35
Os11t0265400-01	Rice	plasma membrane	74.51	81.1
TraesCS4B01G084000.1	Wheat	vacuole	74.23	81.04
TraesCS4A01G232000.1	Wheat	vacuole	73.95	80.73
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	60.78	68.24
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	66.39	65.83
AT3G03330.1	Thale cress	golgi	59.94	65.24
CDX75819	Canola	cytosol, nucleus, plasma membrane	12.04	65.15
KRH00954	Soybean	endoplasmic reticulum	57.7	64.58
CDY43128	Canola	extracellular, golgi, vacuole	58.82	64.02
CDY50699	Canola	extracellular, golgi, vacuole	58.26	63.41
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.26	63.41
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	56.02	62.89
HORVU4Hr1G014360.2	Barley	mitochondrion	66.67	61.18
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	31.37	59.26
KRH40271	Soybean	vacuole	51.82	58.92
CDY50698	Canola	vacuole	49.58	56.37
CDY43129	Canola	extracellular, golgi, vacuole	50.98	44.61
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	42.86	42.74
AT3G03350.2	Thale cress	vacuole	29.69	28.34
Zm00001d022303_P001	Maize	endoplasmic reticulum, extracellular, plastid	24.09	24.64
Zm00001d003938_P001	Maize	golgi, vacuole	22.13	22.57
Zm00001d049161_P001	Maize	golgi, vacuole	20.73	20.73
Zm00001d016580_P001	Maize	cytosol	10.36	20.22
Zm00001d007345_P001	Maize	golgi, vacuole	19.89	19.78
Zm00001d033087_P001	Maize	cytosol	17.09	18.65
Zm00001d034801_P001	Maize	peroxisome	10.36	14.29

Protein Annotations

EntrezGene:100282413	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6EGJ1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM19292.1
PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR45274	InterPro:SDR_fam	SMART:SM00822
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI0004DEB7C4	EnsemblPlantsGene:Zm00001d004616	EnsemblPlants:Zm00001d004616_P008
EnsemblPlants:Zm00001d004616_T008	SEG:seg	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr2:-:122073294..122078694

Molecular Weight (calculated)

39005.5 Da

IEP (calculated)

9.774

GRAVY (calculated)

0.154

Length

357 amino acids

Sequence
(BLAST)

001: MLLLLFFSVL AAVAAFLLFK FATVVDGDLT LVSRGPPLRE RVDGKVVWIT GASRGIGEVI NFLTAVLFFS EPYAFVSSLR NGEVLAMHFA NLGAKLILSA
101: RNKDALARVK KNILSKNPDS RVEMLPMDLS AGEESLKEVV HVAESFFSNA GVDYMVHNAA FERPKRRALE ESEEGLKATL NVNVFGTITL TRLLAPYMLD
201: REMGHFVVMS SAAGKVPAPG QAIYSASKHA LNGYFASLRS ELCTKGIKVT VICPGPIETL QSSAAASSSQ THSAEQKREK RVSVERCVEL TIVAATHGLK
301: EAWISYQPVL TVMYLVQYMP TIGYWLMDKV GAKRLDAAAK KGNTYSWSLI FSSKKSA

Best Arabidopsis Sequence Match ( AT3G03330.1 )
(BLAST)

001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN

Arabidopsis Description

At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.