Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG38108 | Sorghum | plastid | 85.02 | 69.67 |
| Zm00001d016580_P001 | Maize | cytosol | 36.7 | 65.57 |
| Os02t0511400-01 | Rice | endoplasmic reticulum, golgi | 71.56 | 59.24 |
| Zm00001d049161_P001 | Maize | golgi, vacuole | 51.99 | 47.62 |
| Zm00001d007345_P001 | Maize | golgi, vacuole | 51.68 | 47.08 |
| GSMUA_Achr6P12220_001 | Banana | endoplasmic reticulum, plasma membrane | 48.62 | 44.92 |
| Zm00001d022303_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 41.9 | 39.26 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 40.67 | 38.0 |
| Zm00001d034801_P001 | Maize | peroxisome | 23.55 | 29.73 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 18.65 | 17.09 |
Protein Annotations
| EnsemblPlants:Zm00001d033087_P001 | EnsemblPlants:Zm00001d033087_T001 | EnsemblPlantsGene:Zm00001d033087 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR43391 | PANTHER:PTHR43391:SF24 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:ONM06724.1 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI0008446759 | UniProt:A0A1D6KW69 | MapMan:5.9.4 | : | : |
Description
11-beta-hydroxysteroid dehydrogenase-like 5
Coordinates
chr1:+:249987293..249989041
Molecular Weight (calculated)
35761.3 Da
IEP (calculated)
8.525
GRAVY (calculated)
-0.033
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVDKIKRQK TIKSAVNKDI LCNGGGYIYV LICNVHGRIG GQELAYQYAK EGACLALVAR RVQALKAVAA AALERGAPDV LVFPADVSDP EQSRRAVEET
101: VAHFGKLNHL VANAGVWSSC AFDQITNITA FTKLMDVNFW GSVYPTYYAL PHLKASKGKL IVCCSAAGTV ATSRMAFYNA SKAAQLRFYE TLRTEVGSEV
201: GITILTPGYV ESEITKGKGM QKSGEVAVDE EARDAQIGVF PVGRVEALCE VALDGIRNGD WYVTWPSMYR PLQLIACLAP EVLDWMSDAM YKETTQGRRP
301: LGQRIMEATG AKRLYPPSLL QPRIKAD
101: VAHFGKLNHL VANAGVWSSC AFDQITNITA FTKLMDVNFW GSVYPTYYAL PHLKASKGKL IVCCSAAGTV ATSRMAFYNA SKAAQLRFYE TLRTEVGSEV
201: GITILTPGYV ESEITKGKGM QKSGEVAVDE EARDAQIGVF PVGRVEALCE VALDGIRNGD WYVTWPSMYR PLQLIACLAP EVLDWMSDAM YKETTQGRRP
301: LGQRIMEATG AKRLYPPSLL QPRIKAD
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.