Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033087_P001 | Maize | cytosol | 69.67 | 85.02 |
| EES05127 | Sorghum | endoplasmic reticulum, golgi | 67.92 | 75.07 |
| Os02t0511400-01 | Rice | endoplasmic reticulum, golgi | 69.67 | 70.38 |
| EES08518 | Sorghum | golgi, vacuole | 51.63 | 57.87 |
| GSMUA_Achr6P12220_001 | Banana | endoplasmic reticulum, plasma membrane | 47.62 | 53.67 |
| EER99787 | Sorghum | endoplasmic reticulum | 39.35 | 45.11 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 36.84 | 41.88 |
| KXG37163 | Sorghum | endoplasmic reticulum | 32.58 | 34.12 |
| KXG28278 | Sorghum | endoplasmic reticulum | 18.8 | 22.66 |
Protein Annotations
| EnsemblPlants:KXG38108 | EnsemblPlantsGene:SORBI_3001G181600 | Gene3D:3.40.50.720 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF24 | PFAM:PF00106 | PRINTS:PR00081 |
| ProteinID:KXG38108 | ProteinID:KXG38108.1 | SEG:seg | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI00081AE83C |
| UniProt:A0A1B6QJL0 | MapMan:5.9.4 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:15385497..15394231
Molecular Weight (calculated)
43661.8 Da
IEP (calculated)
7.611
GRAVY (calculated)
0.057
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MHASAPPYMH GWFHRLQAAA RASLAHESHG DIRYIIVAER ISIYQVDEDD MEVFLLLHSV VMHVTAALVI LVYIPLSAPV KLLVRAFVKP LRKEDLRGKV
101: VLITGASSGI GEELAYQYAK EGACLALVAR REQALKAVAA AALERGAPDV LVFPGDVSDP DQSRRAVEET VAHFGKLNHL VANAGIWSSC SFDQVTNITA
201: FTKLMDVNFW GSVYPTYYAL PHLKASKGKL IVCSSAAGTV ATSRMAFYNA SKAAQLRFYE TLRTEVGSEV GITILTPGYV ESEITKGKGI QKTGEVAVDE
301: DARDAQIGVF PVGRVEALCE VALDGIRNGD WYVTWPSMYR PLQLIACLAP EVLDWMSNAM YKEAATAQGR RPLGQRILEA TGGKRLYPPS LLQPRIKTD
101: VLITGASSGI GEELAYQYAK EGACLALVAR REQALKAVAA AALERGAPDV LVFPGDVSDP DQSRRAVEET VAHFGKLNHL VANAGIWSSC SFDQVTNITA
201: FTKLMDVNFW GSVYPTYYAL PHLKASKGKL IVCSSAAGTV ATSRMAFYNA SKAAQLRFYE TLRTEVGSEV GITILTPGYV ESEITKGKGI QKTGEVAVDE
301: DARDAQIGVF PVGRVEALCE VALDGIRNGD WYVTWPSMYR PLQLIACLAP EVLDWMSNAM YKEAATAQGR RPLGQRILEA TGGKRLYPPS LLQPRIKTD
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.