Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50698 | Canola | vacuole | 68.87 | 89.49 |
| Bra031996.1-P | Field mustard | endoplasmic reticulum, vacuole | 77.45 | 88.27 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 68.63 | 85.37 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 67.89 | 84.45 |
| AT3G03330.1 | Thale cress | golgi | 64.71 | 80.49 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 11.76 | 72.73 |
| VIT_04s0023g00860.t01 | Wine grape | endoplasmic reticulum, vacuole | 50.98 | 65.41 |
| KRH00954 | Soybean | endoplasmic reticulum | 50.25 | 64.26 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 48.77 | 62.58 |
| Os11t0265400-01 | Rice | plasma membrane | 47.06 | 58.54 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 46.81 | 58.41 |
| TraesCS4B01G084000.1 | Wheat | vacuole | 46.81 | 58.41 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 26.96 | 58.2 |
| TraesCS4A01G232000.1 | Wheat | vacuole | 46.57 | 58.1 |
| KXG28278 | Sorghum | endoplasmic reticulum | 45.83 | 56.5 |
| KRH40271 | Soybean | vacuole | 42.65 | 55.41 |
| GSMUA_Achr6P21340_001 | Banana | endoplasmic reticulum, vacuole | 46.81 | 53.06 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 44.61 | 50.98 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 41.91 | 43.96 |
| CDX90560 | Canola | endoplasmic reticulum | 19.61 | 25.89 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 19.61 | 25.89 |
| CDX71662 | Canola | plasma membrane, vacuole | 18.38 | 25.08 |
| CDX94277 | Canola | mitochondrion | 5.64 | 24.73 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 18.63 | 24.52 |
| CDX83014 | Canola | mitochondrion | 12.01 | 24.26 |
| CDY16353 | Canola | cytosol | 20.34 | 23.78 |
| CDY68167 | Canola | cytosol | 19.85 | 23.21 |
| CDY34029 | Canola | cytosol | 19.36 | 23.17 |
| CDX91557 | Canola | plasma membrane | 16.18 | 23.08 |
| CDY16351 | Canola | plasma membrane | 17.4 | 22.83 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 8.58 | 22.44 |
| CDX83013 | Canola | endoplasmic reticulum | 6.86 | 21.37 |
| CDX83157 | Canola | cytosol | 14.71 | 19.29 |
| CDX90742 | Canola | cytosol | 17.89 | 16.19 |
| CDY05081 | Canola | cytosol | 17.89 | 16.01 |
Protein Annotations
| Gene3D:3.30.70.100 | Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078I0R2 | UniProt:A0A078I0R2 | EnsemblPlants:CDY43129 |
| ProteinID:CDY43129 | ProteinID:CDY43129.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00076100001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00081 |
| ScanProsite:PS00061 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EE63A1 | SEG:seg | : | : | : |
Description
BnaA05g32570DBnaA05g32570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0R2]
Coordinates
chrLK032546:+:33946..37728
Molecular Weight (calculated)
45024.0 Da
IEP (calculated)
9.940
GRAVY (calculated)
-0.138
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTLLFFSLV LLLLLGFLLK FAFAEGDFTL ISKKEVKRKA MEDKVVWITG ANRGIGEALA KQFASLGTKL ILSARNEAEL FRIKSELKGK YAPEHVKVLR
101: LDLPSSEDRL KNVVERAVSL FPEDGVDYLI HNAAYEGPKS NAVDASEENL ETTFGVNVFG TISLTKLVTP HMLKRGGGHF VVISSAAGKV PSPGQAIYAA
201: SKHALQGYFH TLRSEFFQKG IKVTVVCPGP IETSNGTGTS TSEDKNSPEM RVSSERCAEL TIIAASHNLK EAWISHQPEL LVMYLVQYMP SLGLWLMDKV
301: GGKRVEVAEK KKAKAPFKFL FLELQDMTKQ TIVLDVTIKD DKRRTKAKKI AGGTKGVNAM RLDEDKEKQN QEKLTVEGEG VDIVTLARTL KKKVGKTDIF
401: QVTPVTPV
101: LDLPSSEDRL KNVVERAVSL FPEDGVDYLI HNAAYEGPKS NAVDASEENL ETTFGVNVFG TISLTKLVTP HMLKRGGGHF VVISSAAGKV PSPGQAIYAA
201: SKHALQGYFH TLRSEFFQKG IKVTVVCPGP IETSNGTGTS TSEDKNSPEM RVSSERCAEL TIIAASHNLK EAWISHQPEL LVMYLVQYMP SLGLWLMDKV
301: GGKRVEVAEK KKAKAPFKFL FLELQDMTKQ TIVLDVTIKD DKRRTKAKKI AGGTKGVNAM RLDEDKEKQN QEKLTVEGEG VDIVTLARTL KKKVGKTDIF
401: QVTPVTPV
001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
Arabidopsis Description
At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.