Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16351 | Canola | plasma membrane | 93.71 | 86.17 |
| Bra022525.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 93.36 | 85.85 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 81.12 | 67.84 |
| VIT_17s0000g01030.t01 | Wine grape | endoplasmic reticulum, extracellular | 8.74 | 51.02 |
| PGSC0003DMT400028017 | Potato | cytosol | 13.99 | 47.06 |
| KRH59794 | Soybean | extracellular, plasma membrane | 17.83 | 45.54 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 39.16 | 45.16 |
| CDX83013 | Canola | endoplasmic reticulum | 20.63 | 45.04 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 23.78 | 43.59 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 46.15 | 42.72 |
| CDX71662 | Canola | plasma membrane, vacuole | 44.41 | 42.47 |
| CDX90560 | Canola | endoplasmic reticulum | 45.8 | 42.39 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 44.41 | 40.97 |
| Solyc07g052270.2.1 | Tomato | endoplasmic reticulum, vacuole | 49.65 | 40.23 |
| CDY34029 | Canola | cytosol | 45.8 | 38.42 |
| CDY16353 | Canola | cytosol | 46.85 | 38.4 |
| CDY68167 | Canola | cytosol | 46.85 | 38.4 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 45.45 | 37.04 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 44.76 | 36.57 |
| CDX83014 | Canola | mitochondrion | 25.17 | 35.64 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 43.71 | 35.61 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 44.41 | 34.6 |
| CDX83157 | Canola | cytosol | 36.71 | 33.76 |
| PGSC0003DMT400028018 | Potato | plastid | 20.28 | 33.33 |
| Os04t0390800-01 | Rice | plastid | 39.86 | 31.58 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 43.01 | 30.3 |
| CDX94277 | Canola | mitochondrion | 8.39 | 25.81 |
| CDX90742 | Canola | cytosol | 38.46 | 24.39 |
| CDY05081 | Canola | cytosol | 38.46 | 24.12 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 23.78 | 20.73 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 23.78 | 20.73 |
| CDY50698 | Canola | vacuole | 22.38 | 20.38 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 23.08 | 16.18 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 1.75 | 7.58 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:A0A078DRS7 | EnsemblPlants:CDX91557 | ProteinID:CDX91557 | ProteinID:CDX91557.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | EnsemblPlantsGene:GSBRNA2T00152948001 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF10 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI0004EDCD84 |
Description
BnaC02g16030D
Coordinates
chrLK031868:-:404634..407124
Molecular Weight (calculated)
31406.4 Da
IEP (calculated)
7.774
GRAVY (calculated)
0.389
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSINRIINF VFPPLALYGL FVFYPIYQRL KSAVSIWRNV LRENVAGKVV LITGAASGIG EATYEYGKKG AYLALVDIRD EPLFHVAALV EHYGSPEVIP
101: MVADVSKIIS IAVALHDCER FIQAAVLHFG RLDHLVTNAG VAPLYLFEDI DDLSMAMPAM DINFWGSVYC TFFASSYLKK SRGKIVVIAS GCGCIASPRL
201: SFYCASKAAV IAFYETLRIE FGSKVGVTIV APGVVDSEMT QGKFMTKNGQ FIVDKELRDV HISLLPVESA ERCAKAVLRS VCRGDR
101: MVADVSKIIS IAVALHDCER FIQAAVLHFG RLDHLVTNAG VAPLYLFEDI DDLSMAMPAM DINFWGSVYC TFFASSYLKK SRGKIVVIAS GCGCIASPRL
201: SFYCASKAAV IAFYETLRIE FGSKVGVTIV APGVVDSEMT QGKFMTKNGQ FIVDKELRDV HISLLPVESA ERCAKAVLRS VCRGDR
001: MDSINKIINF LFPLLTLYAL LVFYPTYQRL KSAVSICRNL FSENVAGKVV VITGAASGIG EALAYEYGKR GAYLALVDIR GEPLFHVAAL AELYGSPEVL
101: PLVADVSKLQ DCERFIRATV LHFGRLDHLV TNAGVAPLYF FADIEDVSKA SPAMDINFWG SVYCTFFASP YLKKFRGRIV VIASGCGYIA SPRLSFYCAS
201: KAAVIAFYET LRTEFGSDIG VTIVAPGIVD SEMSRGKFMT KDGKLVVDKE LRDVQMSVLP VESAERCAKA IMRSVCRGDR YLLEPDWIGC VILLKVFCSE
301: ATEWVARWLL IARPKFPMME ALSNKILDVA HAFNSFFSFP HY
101: PLVADVSKLQ DCERFIRATV LHFGRLDHLV TNAGVAPLYF FADIEDVSKA SPAMDINFWG SVYCTFFASP YLKKFRGRIV VIASGCGYIA SPRLSFYCAS
201: KAAVIAFYET LRTEFGSDIG VTIVAPGIVD SEMSRGKFMT KDGKLVVDKE LRDVQMSVLP VESAERCAKA IMRSVCRGDR YLLEPDWIGC VILLKVFCSE
301: ATEWVARWLL IARPKFPMME ALSNKILDVA HAFNSFFSFP HY
Arabidopsis Description
HSD611-beta-hydroxysteroid dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.