Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G47360.1 | Thale cress | endoplasmic reticulum | 80.65 | 80.91 |
| CDX83013 | Canola | endoplasmic reticulum | 30.0 | 70.99 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 67.74 | 67.96 |
| CDX90560 | Canola | endoplasmic reticulum | 67.42 | 67.64 |
| CDX83014 | Canola | mitochondrion | 42.9 | 65.84 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 25.16 | 50.0 |
| CDX71662 | Canola | plasma membrane, vacuole | 44.19 | 45.82 |
| KRH59795 | Soybean | extracellular | 47.42 | 45.51 |
| CDY16351 | Canola | plasma membrane | 44.84 | 44.69 |
| CDX91557 | Canola | plasma membrane | 40.97 | 44.41 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 35.16 | 43.95 |
| CDY16353 | Canola | cytosol | 47.74 | 42.41 |
| CDY68167 | Canola | cytosol | 47.1 | 41.83 |
| CDY34029 | Canola | cytosol | 45.16 | 41.06 |
| Solyc07g052270.2.1 | Tomato | endoplasmic reticulum, vacuole | 45.16 | 39.66 |
| CDX83157 | Canola | cytosol | 37.42 | 37.3 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 41.94 | 37.14 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 41.94 | 37.04 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 41.29 | 36.47 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 42.26 | 35.69 |
| Os04t0390800-01 | Rice | plastid | 38.71 | 33.24 |
| CDX94277 | Canola | mitochondrion | 9.68 | 32.26 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 40.65 | 31.03 |
| CDX90742 | Canola | cytosol | 39.68 | 27.27 |
| CDY05081 | Canola | cytosol | 39.68 | 26.97 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 25.81 | 24.39 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 25.81 | 24.39 |
| CDY50698 | Canola | vacuole | 22.58 | 22.29 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 24.52 | 18.63 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 2.9 | 13.64 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:A0A078G9U2 | UniProt:A0A078G9U2 | EnsemblPlants:CDY21787 | ProteinID:CDY21787 |
| ProteinID:CDY21787.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00016319001 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 |
| InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI0004EF202A | SEG:seg |
Description
BnaA06g20560D11-beta-hydroxysteroid dehydrogenase-like 3 [Source:Projected from Arabidopsis thaliana (AT3G47360) UniProtKB/Swiss-Prot;Acc:Q9STY7]
Coordinates
chrLK032124:+:265935..269888
Molecular Weight (calculated)
35320.2 Da
IEP (calculated)
7.902
GRAVY (calculated)
0.205
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMLNTILNL FLPPLTIIFL FLFYPYYLLI KFVVCLYKHL CLENVSGKVT LITGASSGIG EHVAYEYAKK GAYLALVDRL EDRLEMVAET SRKLGSSNVI
101: IIPGDVANVD DCKKFINETI HHFGKLDHLI NNAGVFQTVL FEDLTQVQDA NHIMDINFWG TTYITYFAIP HLRKSNGKII VNTSNSANIP LPLSSVYSAS
201: KAALLRFFET LRVELSPDIK IIIILPGFIA TNMTSPHFIE KYGSDFILSE SVKKCAKAIF RGIARGETYI EEPSWTKWMV LVKNLCPEFV EYSLKYLFYR
301: YLKPSYFKSE
101: IIPGDVANVD DCKKFINETI HHFGKLDHLI NNAGVFQTVL FEDLTQVQDA NHIMDINFWG TTYITYFAIP HLRKSNGKII VNTSNSANIP LPLSSVYSAS
201: KAALLRFFET LRVELSPDIK IIIILPGFIA TNMTSPHFIE KYGSDFILSE SVKKCAKAIF RGIARGETYI EEPSWTKWMV LVKNLCPEFV EYSLKYLFYR
301: YLKPSYFKSE
001: MDILTTILNL LLPPLTIIFL FLFYPFYLLI KLVLCLRKNL HFENVARKVV LITGASSGIG EHVAYEYAKK GAYLALVARR RDRLEIVAET SRQLGSGNVI
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD
Arabidopsis Description
HSD311-beta-hydroxysteroid dehydrogenase-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STY7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.