Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21787 | Canola | endoplasmic reticulum, golgi | 80.91 | 80.65 |
| Bra033794.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 65.7 | 71.99 |
| AT3G47350.2 | Thale cress | endoplasmic reticulum | 74.76 | 71.96 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 47.9 | 49.5 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 47.9 | 49.5 |
| KRH59795 | Soybean | extracellular | 49.84 | 47.68 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 36.25 | 45.16 |
| Solyc07g052270.2.1 | Tomato | endoplasmic reticulum, vacuole | 48.22 | 42.21 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 46.93 | 41.55 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 46.93 | 41.55 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 45.63 | 41.23 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 44.98 | 39.71 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 44.01 | 38.75 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 42.39 | 37.32 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 43.37 | 36.51 |
| Os04t0390800-01 | Rice | plastid | 40.78 | 34.9 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 41.75 | 31.77 |
| AT4G10020.1 | Thale cress | endoplasmic reticulum | 36.57 | 29.05 |
| AT3G03330.1 | Thale cress | golgi | 26.21 | 24.7 |
| AT3G03350.2 | Thale cress | vacuole | 17.15 | 14.17 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | EntrezGene:823890 | ProteinID:AEE78270.1 | ArrayExpress:AT3G47360 | EnsemblPlantsGene:AT3G47360 |
| RefSeq:AT3G47360 | TAIR:AT3G47360 | RefSeq:AT3G47360-TAIR-G | EnsemblPlants:AT3G47360.1 | TAIR:AT3G47360.1 | Symbol:ATHSD3 |
| ProteinID:CAB51208.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006694 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_190320.1 | PFAM:PF00106 | PIRSF:PIRSF000126 | PO:PO:0000293 |
| PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 | UniProt:Q9STY7 |
| InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI000004880A | SEG:seg |
Description
HSD311-beta-hydroxysteroid dehydrogenase-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STY7]
Coordinates
chr3:+:17450852..17452949
Molecular Weight (calculated)
34949.0 Da
IEP (calculated)
8.643
GRAVY (calculated)
0.267
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MDILTTILNL LLPPLTIIFL FLFYPFYLLI KLVLCLRKNL HFENVARKVV LITGASSGIG EHVAYEYAKK GAYLALVARR RDRLEIVAET SRQLGSGNVI
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.