CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	99.68	99.68
CDX91557	Canola	plasma membrane	86.17	93.71
AT5G50770.1	Thale cress	endoplasmic reticulum	83.28	75.73
VIT_17s0000g01030.t01	Wine grape	endoplasmic reticulum, extracellular	8.04	51.02
KRH59794	Soybean	extracellular, plasma membrane	18.33	50.89
PGSC0003DMT400028017	Potato	cytosol	13.83	50.59
CDX83013	Canola	endoplasmic reticulum	19.61	46.56
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	36.98	46.37
CDY09733	Canola	endoplasmic reticulum, golgi	45.98	46.28
CDX90560	Canola	endoplasmic reticulum	45.66	45.95
CDY05818	Canola	endoplasmic reticulum, extracellular	22.51	44.87
CDY21787	Canola	endoplasmic reticulum, golgi	44.69	44.84
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	50.8	44.76
CDX71662	Canola	plasma membrane, vacuole	42.77	44.48
CDY68167	Canola	cytosol	48.23	42.98
CDY34029	Canola	cytosol	46.95	42.82
CDY16353	Canola	cytosol	47.91	42.69
OQU81408	Sorghum	extracellular, golgi, vacuole	45.34	40.17
Zm00001d003938_P001	Maize	golgi, vacuole	44.69	39.71
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	44.37	39.32
CDX83014	Canola	mitochondrion	25.4	39.11
CDX83157	Canola	cytosol	38.91	38.91
HORVU2Hr1G070360.1	Barley	plasma membrane	44.69	37.87
PGSC0003DMT400028018	Potato	plastid	20.9	37.36
Os04t0390800-01	Rice	plastid	40.51	34.9
TraesCS2A01G285100.1	Wheat	mitochondrion	43.73	33.5
CDX94277	Canola	mitochondrion	8.04	26.88
CDX90742	Canola	cytosol	38.59	26.61
CDY05081	Canola	cytosol	38.59	26.32
CDY50699	Canola	extracellular, golgi, vacuole	23.47	22.26
CDY43128	Canola	extracellular, golgi, vacuole	23.47	22.26
CDY50698	Canola	vacuole	21.54	21.34
CDY43129	Canola	extracellular, golgi, vacuole	22.83	17.4
CDX75819	Canola	cytosol, nucleus, plasma membrane	2.25	10.61

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	GO:A0A078FTE1	UniProt:A0A078FTE1	EnsemblPlants:CDY16351	ProteinID:CDY16351
ProteinID:CDY16351.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090880001	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF10
InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI0004EDF141	:

Description

BnaA02g11550DBnaA02g11550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTE1]

Coordinates

chrLK032063:+:103094..105397

Molecular Weight (calculated)

34366.0 Da

IEP (calculated)

7.968

GRAVY (calculated)

0.350

Length

311 amino acids

Sequence
(BLAST)

001: MDSVNRIINF VFPPLALYGL FVFYPIYQRL KSAVSIWRNV LSENVAGKVV LITGAASGIG EATYEYGKKG AYLALVDIRD EPLFHVAALA ELYGSPEVIP
101: MVADVSKLHD CKRFIQATVL HFGRLDHLVT NAGVAPLYLF EDIDDLSKAM PAMDINFWGS VYCTFFASSY LKKSRGKIVV IASGCGYIAS PRLSFYCASK
201: AAVIAFYETL RSEFGSKVGV TIVAPGVVDS EMTQGKFMTK NGQFIVDKEL RDVQISLLPV ESAERCAKAI LRSVCRGDRY LLEPAWISCV ILWKVFCSEV
301: TDSLGRWLVM G

Best Arabidopsis Sequence Match ( AT5G50770.1 )
(BLAST)

001: MDSINKIINF LFPLLTLYAL LVFYPTYQRL KSAVSICRNL FSENVAGKVV VITGAASGIG EALAYEYGKR GAYLALVDIR GEPLFHVAAL AELYGSPEVL
101: PLVADVSKLQ DCERFIRATV LHFGRLDHLV TNAGVAPLYF FADIEDVSKA SPAMDINFWG SVYCTFFASP YLKKFRGRIV VIASGCGYIA SPRLSFYCAS
201: KAAVIAFYET LRTEFGSDIG VTIVAPGIVD SEMSRGKFMT KDGKLVVDKE LRDVQMSVLP VESAERCAKA IMRSVCRGDR YLLEPDWIGC VILLKVFCSE
301: ATEWVARWLL IARPKFPMME ALSNKILDVA HAFNSFFSFP HY

Arabidopsis Description

HSD611-beta-hydroxysteroid dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.