Factsheet for Bra031996.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43129	Canola	extracellular, golgi, vacuole	88.27	77.45
CDY50698	Canola	vacuole	58.1	66.24
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	59.22	64.63
AT3G03330.1	Thale cress	golgi	57.54	62.8
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	28.21	53.44
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	46.93	52.83
KRH00954	Soybean	endoplasmic reticulum	46.93	52.66
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	46.09	51.89
Os11t0265400-01	Rice	plasma membrane	44.69	48.78
TraesCS4D01G081900.1	Wheat	vacuole	44.41	48.62
TraesCS4B01G084000.1	Wheat	vacuole	44.13	48.32
TraesCS4A01G232000.1	Wheat	vacuole	43.85	48.01
KXG28278	Sorghum	endoplasmic reticulum	43.3	46.83
KRH40271	Soybean	vacuole	39.66	45.22
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	44.97	44.72
Zm00001d004616_P008	Maize	endoplasmic reticulum, golgi	42.74	42.86
HORVU4Hr1G014360.2	Barley	mitochondrion	39.39	36.25
Bra041076.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	18.44	22.07
Bra033794.1-P	Field mustard	endoplasmic reticulum, plasma membrane	16.76	21.28
Bra012757.1-P	Field mustard	extracellular, golgi	18.16	21.04
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	17.04	19.61
Bra022523.1-P	Field mustard	endoplasmic reticulum, extracellular	18.99	19.48
Bra000626.1-P	Field mustard	endoplasmic reticulum, extracellular	18.44	19.35
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	17.88	14.32

Protein Annotations

Gene3D:3.30.70.100	Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra031996	EnsemblPlants:Bra031996.1	EnsemblPlants:Bra031996.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
UniProt:M4ET66	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR45274
InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	SignalP:SignalP-noTM	UniParc:UPI0002546332
SEG:seg	:	:	:	:	:

Description

AT3G03330 (E=8e-081) | short-chain dehydrogenase/reductase (SDR) family protein

Coordinates

chrA02:-:26736849..26740463

Molecular Weight (calculated)

39600.8 Da

IEP (calculated)

9.616

GRAVY (calculated)

-0.011

Length

358 amino acids

Sequence
(BLAST)

001: MSLLLICGCV VYSVELICSL PPVGDFTLIS KKEVKCEAVE GKVIWITGAN RGIGEALAKQ FASLGAKLIL SARNEAELFR IKSELKGKYA PEHVKVLRLD
101: LPSSEERLKK VVEQAVSLFP GDGVDYLIHN AAYEGPVIFK RMDASEENLE TTFGVNLFGT ISLTKLVTPH MLKRGGGHFV VISSAVGKVP SPGQAIYAAS
201: KHALQGYFHT LRSEMRVSSE RCAELTIMAA SHNLKEAWIS YQPVLLVMYL VQYMPSLALW LMDKKAKAPF KFLFLELQDM TKQTIVLDVT IKDDKRRTKA
301: KKIAGGTKGV NAMRLDEDKE KQNQEKLTVE GEGVDIVTLA RTLKKKVGKT DIFQVTPV

Best Arabidopsis Sequence Match ( AT3G03330.1 )
(BLAST)

001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN

Arabidopsis Description

At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.