Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g097440.2.1 | Tomato | plastid | 94.97 | 91.19 |
| PGSC0003DMT400092688 | Potato | endoplasmic reticulum | 80.18 | 81.38 |
| PGSC0003DMT400069254 | Potato | endoplasmic reticulum, extracellular, golgi | 71.3 | 69.05 |
| KRH59797 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 34.62 | 57.35 |
| Bra022523.1-P | Field mustard | endoplasmic reticulum, extracellular | 59.17 | 57.31 |
| CDY16353 | Canola | cytosol | 59.17 | 57.31 |
| CDY68167 | Canola | cytosol | 59.17 | 57.31 |
| Bra000626.1-P | Field mustard | endoplasmic reticulum, extracellular | 57.69 | 57.18 |
| CDY34029 | Canola | cytosol | 57.69 | 57.18 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 58.28 | 56.45 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 58.28 | 56.45 |
| VIT_17s0000g01050.t01 | Wine grape | golgi, vacuole | 52.66 | 55.28 |
| CDX83157 | Canola | cytosol | 48.82 | 53.05 |
| PGSC0003DMT400028017 | Potato | cytosol | 12.72 | 50.59 |
| PGSC0003DMT400074514 | Potato | endoplasmic reticulum, golgi | 52.07 | 49.86 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 35.8 | 48.79 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 48.52 | 46.86 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 48.22 | 46.44 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 46.45 | 44.73 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 47.04 | 43.32 |
| PGSC0003DMT400028018 | Potato | plastid | 21.01 | 40.8 |
| Os04t0390800-01 | Rice | plastid | 41.72 | 39.06 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 45.56 | 37.93 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 15.38 | 27.51 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | UniProt:M1CIF4 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | EnsemblPlantsGene:PGSC0003DMG400026485 | PGSC:PGSC0003DMG400026485 | EnsemblPlants:PGSC0003DMT400068094 | PRINTS:PR00080 |
| PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 | InterPro:SDR_fam | SUPFAM:SSF51735 |
| InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI00029643ED | SEG:seg | : | : |
Description
Steroleosin [Source:PGSC_GENE;Acc:PGSC0003DMG400026485]
Coordinates
chr3:-:46234326..46237325
Molecular Weight (calculated)
38053.5 Da
IEP (calculated)
5.520
GRAVY (calculated)
0.199
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLDLIHKF LNLVAPPFTL FTLLIFLPPY QFIKYFLPIL GKIFSEDVAG KVIVITGASS GIGEHLAYEY ARRGACLTIA ARREKSLREV AERALDLGAP
101: DVLVVPADVS KVEDLDHLVN NAGITSVSLF EEIEDITNMR SIMDINFWGS VYMTRFAIPY LRYSEGRIIV LSSAASWMPA PRISLYSASK AAMVLFFEAL
201: RIEFGRDIKI TLVTPGFVES EMTQGKFIDK TGKVDVNPQM RDVEVGITPV MKVEDCAKTI VNGACRGERY ITVPSWFRVT YLWKVFCPDV VEWFLRLLYL
301: SGWGASPEDA PSKKILDYTG VQKVLYPENI RELEPKTE
101: DVLVVPADVS KVEDLDHLVN NAGITSVSLF EEIEDITNMR SIMDINFWGS VYMTRFAIPY LRYSEGRIIV LSSAASWMPA PRISLYSASK AAMVLFFEAL
201: RIEFGRDIKI TLVTPGFVES EMTQGKFIDK TGKVDVNPQM RDVEVGITPV MKVEDCAKTI VNGACRGERY ITVPSWFRVT YLWKVFCPDV VEWFLRLLYL
301: SGWGASPEDA PSKKILDYTG VQKVLYPENI RELEPKTE
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.