Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068094 | Potato | extracellular, plasma membrane, vacuole | 81.38 | 80.18 |
| PGSC0003DMT400069254 | Potato | endoplasmic reticulum, extracellular, golgi | 71.77 | 68.48 |
| PGSC0003DMT400028017 | Potato | cytosol | 16.52 | 64.71 |
| Bra000626.1-P | Field mustard | endoplasmic reticulum, extracellular | 60.06 | 58.65 |
| CDY34029 | Canola | cytosol | 60.06 | 58.65 |
| Bra022523.1-P | Field mustard | endoplasmic reticulum, extracellular | 60.06 | 57.31 |
| CDY16353 | Canola | cytosol | 60.06 | 57.31 |
| CDY68167 | Canola | cytosol | 60.06 | 57.31 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 58.86 | 56.16 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 58.86 | 56.16 |
| VIT_17s0000g01050.t01 | Wine grape | golgi, vacuole | 53.15 | 54.97 |
| CDX83157 | Canola | cytosol | 50.15 | 53.7 |
| KRH59797 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 32.13 | 52.45 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 36.64 | 49.19 |
| PGSC0003DMT400074514 | Potato | endoplasmic reticulum, golgi | 50.75 | 47.88 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 47.45 | 45.14 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 47.45 | 45.01 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 47.15 | 44.73 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 47.75 | 43.32 |
| Os04t0390800-01 | Rice | plastid | 43.54 | 40.17 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 46.25 | 37.93 |
| PGSC0003DMT400028018 | Potato | plastid | 18.62 | 35.63 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 14.71 | 25.93 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400092688 | EnsemblPlantsGene:PGSC0003DMG400042259 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF10 | PFAM:PF00106 | PGSC:PGSC0003DMG400042259 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI00029603A7 | UniProt:M1DQB9 | MapMan:5.9.4 | : | : | : |
Description
Steroleosin [Source:PGSC_GENE;Acc:PGSC0003DMG400042259]
Coordinates
chr3:-:46231913..46233610
Molecular Weight (calculated)
37377.8 Da
IEP (calculated)
6.528
GRAVY (calculated)
0.266
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLLDLIHKF LNLVAPPFTL FTLLFLLPPY QFIKFILSIL STVYSEDVAG KVVVITGASS GIGEHLAYEY ARRGACLAIA ARREKSLLEV AERALDLGAP
101: DVLVVPADVS NVDDCRRIVD RTMSHFGRLD HLVNNAGVTA VALFEEIEDI TNFRSIMDIN FWGSIYMTKF AIPYLRRSEG RIIVLSSAAS WIPAPRMSLY
201: AALRIEFGRD IKITLITPGY VESEMTQGKF IDKTGKVDVD PQMRDAQVSI IPVVKVEECA KAIVNGSCRG ERYVTVPAWF KVTYLWKVFF PEVVEWILRL
301: LWLSSSGTSP EDALSKKILD YTGLQKVLYP ENI
101: DVLVVPADVS NVDDCRRIVD RTMSHFGRLD HLVNNAGVTA VALFEEIEDI TNFRSIMDIN FWGSIYMTKF AIPYLRRSEG RIIVLSSAAS WIPAPRMSLY
201: AALRIEFGRD IKITLITPGY VESEMTQGKF IDKTGKVDVD PQMRDAQVSI IPVVKVEECA KAIVNGSCRG ERYVTVPAWF KVTYLWKVFF PEVVEWILRL
301: LWLSSSGTSP EDALSKKILD YTGLQKVLYP ENI
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.