Factsheet for Os02t0511100-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0511400-01	Rice	endoplasmic reticulum, golgi	74.66	68.61
Os11t0499600-01	Rice	endoplasmic reticulum, golgi	54.82	56.21
GSMUA_Achr6P12220_001	Banana	endoplasmic reticulum, plasma membrane	53.17	54.52
Os12t0464400-01	Rice	plastid	40.5	42.12
Os04t0390700-01	Rice	plastid	42.7	42.12
Os04t0390800-01	Rice	plastid	37.47	37.67
Os03t0842900-01	Rice	plastid	35.26	36.06
Os11t0265400-01	Rice	plasma membrane	21.76	24.09

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	UniProt:A0A0P0VJG9	ProteinID:BAS78860.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os02g0511100	EnsemblPlants:Os02t0511100-00	PFAM:PF00106
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF24	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI000393953B	SEG:seg	:	:

Description

Similar to Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed. (Os02t0511100-00)

Coordinates

chr2:+:18277595..18286711

Molecular Weight (calculated)

39247.7 Da

IEP (calculated)

9.069

GRAVY (calculated)

0.174

Length

363 amino acids

Sequence
(BLAST)

001: MGRVYLPIHS VLMHVVAALV VLVYIPLSVP VRLFLWAFVK PLRREQLRGK VVLITGASSG IGEELAYQYA SKGASLALVA RRKQALKSVA AAARERGAPD
101: VLVLDADVSD AGQSRRAVEE TIAHYGKLNH LVANAGIWST CPFDEITNIT AFTTIMDVNF WGAVYPTYYA LPHLKASRGK LVVCSSAAGT VATSRMSFYN
201: ASKAAVLRFY ETLRAELGSE VGVTILTHGY VESEMTMGKA VQKDGVLVVD QEARDVQIGV FPVGGVGAMC RVAMDGIRRG DRYVTWPSVY RPLQLVACLA
301: PEIVSWLSYA MYNTKAGGGA PLSKRALDAT GARRFFPEGL RRNPVVIKTD EECDGDEGVA ACN

Best Arabidopsis Sequence Match ( AT5G50770.1 )
(BLAST)

001: MDSINKIINF LFPLLTLYAL LVFYPTYQRL KSAVSICRNL FSENVAGKVV VITGAASGIG EALAYEYGKR GAYLALVDIR GEPLFHVAAL AELYGSPEVL
101: PLVADVSKLQ DCERFIRATV LHFGRLDHLV TNAGVAPLYF FADIEDVSKA SPAMDINFWG SVYCTFFASP YLKKFRGRIV VIASGCGYIA SPRLSFYCAS
201: KAAVIAFYET LRTEFGSDIG VTIVAPGIVD SEMSRGKFMT KDGKLVVDKE LRDVQMSVLP VESAERCAKA IMRSVCRGDR YLLEPDWIGC VILLKVFCSE
301: ATEWVARWLL IARPKFPMME ALSNKILDVA HAFNSFFSFP HY

Arabidopsis Description

HSD611-beta-hydroxysteroid dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.