CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G049400.1	Wheat	cytosol	22.44	39.77
TraesCS2B01G062900.1	Wheat	plastid	30.13	29.38
KRH19921	Soybean	plastid	33.33	28.11
KRH32533	Soybean	plastid	33.33	27.37
Zm00001d025033_P001	Maize	plastid	30.77	27.27
Os04t0194600-01	Rice	plastid	30.13	26.7
EES10469	Sorghum	plastid	29.49	25.99
CDY60249	Canola	cytosol	33.97	25.48
Bra025528.1-P	Field mustard	nucleus	35.9	25.0
KRG89108	Soybean	nucleus, plastid	37.18	25.0
KRH36141	Soybean	nucleus	39.1	24.8
CDY48964	Canola	nucleus	34.62	24.55
KRG90619	Soybean	nucleus	37.18	23.97
KRH40904	Soybean	nucleus	36.54	23.85
KRH40902	Soybean	nucleus	36.54	23.75
KRG99108	Soybean	nucleus	36.54	20.88
AT5G41030.1	Thale cress	nucleus	32.05	20.58
KRH45889	Soybean	nucleus	37.18	20.28
KRH49755	Soybean	nucleus	23.72	18.69
KRG94577	Soybean	nucleus	39.1	18.48
KRH06910	Soybean	nucleus	39.1	17.68
KRH35393	Soybean	nucleus	33.97	17.04
KRG91429	Soybean	nucleus	33.97	16.26
KRH65181	Soybean	nucleus	34.62	16.07
KRH03994	Soybean	nucleus	34.62	15.88
KRH48289	Soybean	nucleus	33.97	15.82
KRH06094	Soybean	plastid	35.9	15.51
KRH57263	Soybean	nucleus	33.97	15.32
KRH63357	Soybean	nucleus	38.46	15.08
KRH54542	Soybean	nucleus	38.46	14.71
KRH56919	Soybean	nucleus	38.46	14.42
KRH74835	Soybean	nucleus	35.26	14.29
KRH03466	Soybean	nucleus	37.82	14.29
KRH70699	Soybean	nucleus	36.54	13.44
KRH26343	Soybean	nucleus, plastid	36.54	13.13

Protein Annotations

EntrezGene:102664523	MapMan:15.5.19	EMBL:ACUP02007042	EnsemblPlantsGene:GLYMA_11G196000	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	UniProt:K7LQD2	EnsemblPlants:KRH30615	ProteinID:KRH30615	ProteinID:KRH30615.1
PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF73	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI00023CB95F	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:26998156..26998643

Molecular Weight (calculated)

17016.5 Da

IEP (calculated)

6.108

GRAVY (calculated)

-0.117

Length

156 amino acids

Sequence
(BLAST)

001: MASETPITLK AINTKLPSLK AKKDRHTKVN GRERRVLLPP LCAARVFQLT HELGYKTHGE TIEWLLRQAE PSIIAATGTG ILPSSMVVSA STSTPSLCED
101: ESTIGMHTNP MVVSTDNEIE SKKEFLPLDL DSLANFDVEF SANEVAILQS LITKLG

Best Arabidopsis Sequence Match ( AT5G08330.1 )
(BLAST)

001: MADNDGAVSN GIIVEQTSNK GPLNAVKKPP SKDRHSKVDG RGRRIRMPII CAARVFQLTR ELGHKSDGQT IEWLLRQAEP SIIAATGTGT TPASFSTASL
101: STSSPFTLGK RVVRAEEGES GGGGGGGLTV GHTMGTSLMG GGGSGGFWAV PARPDFGQVW SFATGAPPEM VFAQQQQPAT LFVRHQQQQQ ASAAAAAAMG
201: EASAARVGNY LPGHHLNLLA SLSGGANGSG RREDDHEPR

Arabidopsis Description

TCP21Transcription factor TCP21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FTA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.