Factsheet for Os04t0194600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G049400.1	Wheat	cytosol	42.61	85.23
TraesCS2B01G062900.1	Wheat	plastid	64.77	71.25
Zm00001d025033_P001	Maize	plastid	65.34	65.34
EES10469	Sorghum	plastid	65.34	64.97
KRH19921	Soybean	plastid	42.61	40.54
Os03t0422702-00	Rice	cytosol, plastid	27.84	38.89
KRH32533	Soybean	plastid	41.48	38.42
VIT_08s0040g01600.t01	Wine grape	nucleus, plastid	43.18	37.25
KRH30615	Soybean	cytosol	26.7	30.13
Os02t0635800-01	Rice	nucleus	34.66	28.91
PGSC0003DMT400055541	Potato	plastid	31.82	27.86
Os04t0526000-01	Rice	plastid	32.39	27.67
AT2G37000.1	Thale cress	nucleus, plastid	29.55	27.66
Solyc09g008030.1.1	Tomato	plastid	31.25	27.36
Os02t0828566-01	Rice	nucleus	35.23	26.27
AT3G45150.1	Thale cress	nucleus	22.73	24.24
Os04t0542302-00	Rice	cytosol, mitochondrion, nucleus	25.57	23.68
CDY60249	Canola	cytosol	27.27	23.08
CDY48964	Canola	nucleus	27.84	22.27
Bra025528.1-P	Field mustard	nucleus	27.84	21.88
AT5G41030.1	Thale cress	nucleus	25.0	18.11
PGSC0003DMT400095626	Potato	plastid	27.84	17.5
Os01t0924400-01	Rice	nucleus	29.55	16.4
Os09t0521300-00	Rice	nucleus	33.52	15.49
Os11t0175700-00	Rice	nucleus, plastid	33.52	14.53
Os08t0544800-01	Rice	nucleus	30.68	14.48
Os06t0226700-01	Rice	nucleus	31.25	14.21
Os02t0747400-01	Rice	nucleus	32.39	13.9
Os12t0173300-00	Rice	nucleus	31.82	13.4

Protein Annotations

MapMan:15.5.19	UniProt:A0A0P0W7T3	ProteinID:BAS88038.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	EnsemblPlantsGene:Os04g0194600	EnsemblPlants:Os04t0194600-01	PFAM:PF03634	PFscan:PS51369
PANTHER:PTHR31072	PANTHER:PTHR31072:SF25	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0001B662DE	SEG:seg

Description

PROLIFERATING CELL FACTOR 1, PROMOTER BINDING FACTOR1Similar to PCF1. (Os04t0194600-01)

Coordinates

chr4:-:6490902..6495594

Molecular Weight (calculated)

18083.2 Da

IEP (calculated)

7.854

GRAVY (calculated)

-0.272

Length

176 amino acids

Sequence
(BLAST)

001: ILYNLVPAQP LNPSAIPNPN PDLSIAAAEP PSSDGATPRR VRPRKSPSSS DRHSKVAGRG RRVRIPAMVA ARVFQLTREL GHRTDGETIE WLLRQAEPSI
101: IAATGTGVTP EEAPPAAVAI GSSSVAAAAA AGGHGGAFVH VPYYTALLMQ PPNADEPPMA SAASASGTTA ADENNN

Best Arabidopsis Sequence Match ( AT5G23280.1 )
(BLAST)

001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR

Arabidopsis Description

TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.