CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32533	Soybean	plastid	90.81	88.42
TraesCS2D01G049400.1	Wheat	cytosol	25.41	53.41
VIT_08s0040g01600.t01	Wine grape	nucleus, plastid	57.84	52.45
TraesCS2B01G062900.1	Wheat	plastid	37.3	43.12
Os04t0194600-01	Rice	plastid	40.54	42.61
Zm00001d025033_P001	Maize	plastid	37.3	39.2
EES10469	Sorghum	plastid	36.76	38.42
KRH30615	Soybean	cytosol	28.11	33.33
Solyc09g008030.1.1	Tomato	plastid	32.97	30.35
PGSC0003DMT400055541	Potato	plastid	32.97	30.35
KRH36141	Soybean	nucleus	31.89	23.98
KRG89108	Soybean	nucleus, plastid	29.73	23.71
KRH40904	Soybean	nucleus	30.27	23.43
KRH40902	Soybean	nucleus	30.27	23.33
KRG90619	Soybean	nucleus	29.73	22.73
KRH45889	Soybean	nucleus	34.59	22.38
KRG99108	Soybean	nucleus	32.97	22.34
KRH49755	Soybean	nucleus	22.7	21.21
KRH35393	Soybean	nucleus	34.05	20.26
KRH48289	Soybean	nucleus	36.22	20.0
KRH03994	Soybean	nucleus	36.76	20.0
KRH65181	Soybean	nucleus	35.68	19.64
KRG94577	Soybean	nucleus	34.59	19.39
KRH57263	Soybean	nucleus	36.22	19.36
KRG91429	Soybean	nucleus	34.05	19.33
KRH06910	Soybean	nucleus	34.59	18.55
KRH63357	Soybean	nucleus	37.84	17.59
KRH06094	Soybean	plastid	34.05	17.45
KRH54542	Soybean	nucleus	38.38	17.4
KRH03466	Soybean	nucleus	36.76	16.46
KRH56919	Soybean	nucleus	36.76	16.35
KRH74835	Soybean	nucleus	33.51	16.1
KRH70699	Soybean	nucleus	35.68	15.57
KRH26343	Soybean	nucleus, plastid	33.51	14.29

Protein Annotations

EntrezGene:100811316	MapMan:15.5.19	EMBL:ACUP02008216	EnsemblPlantsGene:GLYMA_13G144100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	UniProt:K7LZR4	EnsemblPlants:KRH19921	ProteinID:KRH19921	ProteinID:KRH19921.1
PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF71	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI000233CEE4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:25678350..25679495

Molecular Weight (calculated)

19616.4 Da

IEP (calculated)

7.565

GRAVY (calculated)

-0.237

Length

185 amino acids

Sequence
(BLAST)

001: MTSQVVLHNN FETKPSATVT TIVESPSVAP PSLAVAKRPS TKDRHTKVNG RGRRVRMPPL CAARIFQLTR ELGHRSDGET IEWLLRHAET SIIAATGSGT
101: VPAAPVSSVG PSAPSSEPMV ACPVTAVGAQ GMFAVPPQPS CRLDLSPPPG MEFAVNGYRH MPFTALLLQP ATADENQNDE SLGEQ

Best Arabidopsis Sequence Match ( AT2G37000.1 )
(BLAST)

001: MIFQNVCRNE SNFNAIASES RSQTQFGVSK SSSSGGGCIS ARTKDRHTKV NGRSRRVTMP ALAAARIFQL TRELGHKTEG ETIEWLLSQA EPSIIAATGY
101: GTKLISNWVD VAADDSSSSS SMTSPQTQTQ TPQSPSCRLD LCQPIGIQYP VNGYSHMPFT AMLLEPMTTT AESEVEIAEE EERRRRHH

Arabidopsis Description

TCP11Transcription factor TCP11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.