Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH03466 | Soybean | nucleus | 87.98 | 88.62 |
VIT_17s0000g06020.t01 | Wine grape | nucleus | 65.87 | 74.46 |
KRH63357 | Soybean | nucleus | 64.9 | 67.84 |
KRH54542 | Soybean | nucleus | 65.87 | 67.16 |
Solyc03g116320.2.1 | Tomato | nucleus | 64.9 | 66.01 |
PGSC0003DMT400001613 | Potato | nucleus | 64.66 | 64.98 |
GSMUA_Achr6P02720_001 | Banana | nucleus | 38.22 | 58.89 |
GSMUA_Achr4P00500_001 | Banana | nucleus | 38.22 | 58.46 |
KRH49755 | Soybean | nucleus | 26.68 | 56.06 |
GSMUA_Achr7P20990_001 | Banana | nucleus | 36.06 | 55.97 |
CDY36943 | Canola | nucleus | 23.8 | 52.38 |
KRH74835 | Soybean | nucleus | 45.91 | 49.61 |
KRH70699 | Soybean | nucleus | 50.24 | 49.29 |
CDY24170 | Canola | nucleus | 28.12 | 48.15 |
Os06t0226700-01 | Rice | nucleus | 44.47 | 47.8 |
GSMUA_Achr7P17990_001 | Banana | nucleus | 37.98 | 47.02 |
Zm00001d037221_P001 | Maize | cytosol, nucleus, peroxisome | 42.79 | 46.97 |
Zm00001d052256_P001 | Maize | cytosol, nucleus, peroxisome | 43.51 | 46.53 |
Zm00001d018045_P001 | Maize | cytosol, nucleus, peroxisome | 44.71 | 46.5 |
EER88112 | Sorghum | nucleus | 43.75 | 46.19 |
EES07255 | Sorghum | nucleus | 43.99 | 45.98 |
Zm00001d044836_P001 | Maize | nucleus | 38.46 | 44.82 |
KRG99108 | Soybean | nucleus | 29.09 | 44.32 |
HORVU6Hr1G075650.1 | Barley | nucleus | 42.79 | 44.28 |
TraesCS7B01G091900.1 | Wheat | cytosol, nucleus, peroxisome | 39.42 | 44.09 |
KRH45889 | Soybean | nucleus | 30.29 | 44.06 |
TraesCS6D01G285600.1 | Wheat | nucleus | 42.31 | 43.89 |
TraesCS6A01G306500.1 | Wheat | nucleus | 42.55 | 43.81 |
Os02t0747400-01 | Rice | nucleus | 43.03 | 43.66 |
TraesCS6B01G334900.1 | Wheat | nucleus | 42.07 | 43.53 |
HORVU7Hr1G038130.1 | Barley | nucleus | 41.59 | 43.25 |
TraesCS7D01G187600.1 | Wheat | cytosol | 41.11 | 42.75 |
Bra018126.1-P | Field mustard | nucleus | 47.6 | 42.49 |
AT3G47620.1 | Thale cress | nucleus | 47.36 | 40.29 |
KRG90619 | Soybean | nucleus | 23.08 | 39.67 |
KRH30615 | Soybean | cytosol | 14.42 | 38.46 |
KRH36141 | Soybean | nucleus | 22.6 | 38.21 |
KRH32533 | Soybean | plastid | 17.31 | 37.89 |
KRG89108 | Soybean | nucleus, plastid | 20.67 | 37.07 |
KRH19921 | Soybean | plastid | 16.35 | 36.76 |
KRH40904 | Soybean | nucleus | 20.67 | 35.98 |
KRH40902 | Soybean | nucleus | 20.67 | 35.83 |
KRH06094 | Soybean | plastid | 29.57 | 34.07 |
KRG94577 | Soybean | nucleus | 24.28 | 30.61 |
KRH35393 | Soybean | nucleus | 22.36 | 29.9 |
KRG91429 | Soybean | nucleus | 22.84 | 29.14 |
KRH26343 | Soybean | nucleus, plastid | 30.29 | 29.03 |
KRH06910 | Soybean | nucleus | 23.56 | 28.41 |
KRH57263 | Soybean | nucleus | 22.84 | 27.46 |
KRH03994 | Soybean | nucleus | 22.36 | 27.35 |
KRH48289 | Soybean | nucleus | 21.39 | 26.57 |
KRH65181 | Soybean | nucleus | 21.15 | 26.19 |
Protein Annotations
EntrezGene:100790785 | MapMan:15.5.19 | EMBL:ACUP02002802 | EnsemblPlantsGene:GLYMA_05G027400 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | InterPro:IPR017887 | UniProt:K7KMJ2 | EnsemblPlants:KRH56919 | ProteinID:KRH56919 | ProteinID:KRH56919.1 |
PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF40 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
UniParc:UPI0002339CB9 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:2388743..2390840
Molecular Weight (calculated)
44897.6 Da
IEP (calculated)
7.359
GRAVY (calculated)
-0.690
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDDDLHHH HHRQNNFPFQ LLEKKEDQET ASCSTSSLYP SLAISAEPST SNSTRSNQLA VAAAAEAPNS KKPPPKRTST KDRHTKVDGR GRRIRMPALC
101: AARVFQLTRE LGHKSDGETI EWLLQQAEPA VIAATGTGTI PANFTSLNIS LRSSGSSMSV PSQLRSSYFN PNFSLQQHQR RTFFPGIAFS SDNTNNNTST
201: LLNFQSNTLN TTMLQQQAKP ELSDGGVPSS LDISDTNTED TTTTTTTTTN LSRKRRPATT EQDLSSSTQQ HQMGSYLLQS SAGAIPASHA ANIWMVANSN
301: SNQVMSGDPI WTFPPVNNSA LYRGTMSSGL HFMNFPTPVA LLPSQQLGSS GNIGAVGGSS HNNHNNNINE GHLSMLAGLS PYRPVIGVSE SQASGSQSHR
401: GSGTDDRHDN SSSHHS
101: AARVFQLTRE LGHKSDGETI EWLLQQAEPA VIAATGTGTI PANFTSLNIS LRSSGSSMSV PSQLRSSYFN PNFSLQQHQR RTFFPGIAFS SDNTNNNTST
201: LLNFQSNTLN TTMLQQQAKP ELSDGGVPSS LDISDTNTED TTTTTTTTTN LSRKRRPATT EQDLSSSTQQ HQMGSYLLQS SAGAIPASHA ANIWMVANSN
301: SNQVMSGDPI WTFPPVNNSA LYRGTMSSGL HFMNFPTPVA LLPSQQLGSS GNIGAVGGSS HNNHNNNINE GHLSMLAGLS PYRPVIGVSE SQASGSQSHR
401: GSGTDDRHDN SSSHHS
001: MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
Arabidopsis Description
TCP14Transcription factor TCP14 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.