Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
  • peroxisome 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012068.1-P Field mustard cytosol 15.19 29.44
Solyc02g084080.1.1 Tomato cytosol 9.74 27.42
KRH51726 Soybean cytosol, mitochondrion, nucleus, plastid 30.37 26.04
KRH61063 Soybean nucleus 30.09 24.42
Solyc02g038790.1.1 Tomato cytosol 13.18 22.89
GSMUA_Achr1P19920_001 Banana cytosol 27.79 21.75
Os04t0663200-01 Rice cytosol 24.36 21.63
GSMUA_Achr3P11230_001 Banana cytosol 28.65 21.6
Zm00001d001952_P001 Maize mitochondrion 27.79 21.46
KRH69800 Soybean plastid 33.81 21.26
EES13033 Sorghum mitochondrion 26.93 20.89
KRH28782 Soybean cytosol, nucleus, plastid 29.23 20.69
KRH69802 Soybean mitochondrion 33.52 20.56
Zm00001d026536_P002 Maize nucleus 27.79 20.29
TraesCS2B01G520300.1 Wheat mitochondrion 30.37 19.81
HORVU2Hr1G109820.1 Barley mitochondrion 29.23 19.32
TraesCS2D01G492400.1 Wheat mitochondrion 30.37 19.13
TraesCS2A01G492200.1 Wheat mitochondrion 30.37 19.1
AT5G66270.1 Thale cress cytosol 23.5 18.26
CDX73744 Canola mitochondrion, nucleus 25.5 17.84
CDY67080 Canola cytosol, nucleus, plastid 19.77 17.42
CDX77980 Canola mitochondrion, nucleus, plastid 23.5 17.37
Bra036832.1-P Field mustard nucleus 24.64 17.34
Solyc02g084160.1.1 Tomato cytosol 7.74 16.98
KRH76672 Soybean nucleus 18.62 16.71
HORVU2Hr1G109740.2 Barley plastid 28.94 16.34
CDY45225 Canola cytosol, nucleus, plastid 18.62 15.89
PGSC0003DMT400009146 Potato nucleus 26.36 15.21
AT3G51180.1 Thale cress nucleus 22.64 15.16
VIT_04s0023g03180.t01 Wine grape cytosol 30.66 15.03
Solyc02g084200.1.1 Tomato nucleus 24.36 14.31
Solyc02g084110.1.1 Tomato cytosol 5.73 13.16
PGSC0003DMT400092162 Potato nucleus 20.63 12.83
PGSC0003DMT400009142 Potato plasma membrane 18.34 11.85
Protein Annotations
EMBL:ACUP02006765EnsemblPlants:KRH28783EnsemblPlantsGene:GLYMA_11G075900EntrezGene:102661359GO:GO:0003674GO:GO:0005488
GO:GO:0046872InterPro:IPR000571InterPro:Znf_CCCHInterPro:Znf_CCCH_sfPANTHER:PTHR33400PANTHER:PTHR33400:SF5
PFscan:PS50103ProteinID:KRH28783ProteinID:KRH28783.1SUPFAM:SSF90229UniParc:UPI0002962E95UniProt:K7LNJ4
MapMan:15.5.16:::::
Description
hypothetical protein
Coordinates
chr11:+:5678664..5681623
Molecular Weight (calculated)
38493.8 Da
IEP (calculated)
5.524
GRAVY (calculated)
-0.815
Length
349 amino acids
Sequence
(BLAST)
001: MDRSKNSKTV RWAQESSLRE VHVFSPDKDC SSMVGKKCQE HLQAKSSSIS PSTTDDNNDL PPGFRPIIDV SRIPQIKWKC PPSVVLNSGW RMAAGEESTE
101: KDNQKQRELK KLEAVYPRDS HIPADPFVSS DVENELGYDD SDTPLVPLES EEDVENELGY DDSDSTPLVP LESKEDIAIS TVPPSNLGEA DVATALATVM
201: AIVKHNEEPG NSIIDANFIL RLANDPKMLK ELTDSNNNNP ENASLTMPAP PQITATAQTS PPPSLKRGTK RAIPSGSERK SCSEQAWPSG GSVSSSQPRV
301: VKKDVDYYRN QVTKNDSGKV NKQCKFYNTS KGCRNGSRCR FQHTSVWKM
Best Arabidopsis Sequence Match ( AT4G02560.2 )
(BLAST)
001: MDAFKEEIEI GSSVESLMEL LDSQKVLFHS QIDQLQDVVV AQCKLTGVNP LAQEMAAGAL SIKIGKRPRD LLNPKAVKYL QAVFAIKDAI SKRESREISA
101: LFGITVAQVR EFFVTQKTRV RKQVRLSREK VVMSNTHALQ DDGVPENNNA TNHVEPVPLN SIHPEACSIS WGEGETVALI PPEDIPPDIS DSDKYFVENI
201: FSLLRKEETF SGQVKLMEWI MQIQDASVLI WFLSKGGVLI LTTWLSQAAS EEQTSVLLLI LKVLCHLPLH KASPENMSAI LQSVNGLRFY RISDISNRAK
301: GLLSRWTKLF AKIQAMKKQN RNSSQIDSQS QLLLKQSIAE IMGDSSNPED ILSLSNGKSE NVRRIESSQG PKLLLTSADD STKKHMLGSN PSYNKERRKV
401: QMVEQPGQKA AGKSPQTVRI GTSGRSRPMS ADDIQKAKMR ALYMQSKNSK KDPLPSAIGD SKIVAPEKPL ALHSAKDSPP IQNNEAKTED TPVLSTVQPV
501: NGFSTIQPVN GPSAVQPVNG PLAVQPVNGP SALQPVNGPS AVIVPVQADE IKKPSTPPKS ISSKVGVMMK MSSQTILKNC KRKQIDWHVP PGMELDELWR
601: VAAGGNSKEA DVQRNRNRRE RETTYQSLQT IPLNPKEPWD REMDYDDSLT PEIPSQQPPE ESLTEPQDSL DERRIAAGAA TTSSSLSSPE PDLELLAALL
701: KNPDLVYALT SGKPSNLAGQ DMVKLLDVIK TGAPNSSSSS NKQVEERVEV SLPSPTPSTN PGMSGWGQEG IRNPFSRQNQ VGTAVARSGT QLRVGSMQWH
801: QTNEQSIPRH APSAYSNSIT LAHTEREQQQ YMQPKLHHNL HFQQQQQQPI STTSYAVREP VGQMGTGTSS SWRSQQSQNS YYSHQENEIA SASQVTSYQG
901: NSQYMSSNPG YESWSPDNSP SRNQLNMRGQ QQQASRKHDS STHPYWNQNK RWR
Arabidopsis Description
LDHomeobox protein LUMINIDEPENDENS [Source:UniProtKB/Swiss-Prot;Acc:Q38796]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.