Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33624 | Soybean | cytosol, nucleus, plastid | 69.91 | 80.61 |
| KRH34540 | Soybean | nucleus | 47.79 | 50.0 |
| VIT_05s0049g01730.t01 | Wine grape | cytosol, nucleus, plastid | 40.71 | 50.0 |
| KRG92271 | Soybean | nucleus | 46.9 | 48.62 |
| Bra021848.1-P | Field mustard | cytosol, nucleus, plastid | 36.28 | 48.24 |
| AT2G33390.1 | Thale cress | cytosol, extracellular, nucleus | 38.05 | 43.88 |
| CDX84690 | Canola | cytosol, nucleus, plastid | 34.51 | 43.33 |
| Bra022937.1-P | Field mustard | cytosol, nucleus, plastid | 33.63 | 42.22 |
| CDY23741 | Canola | cytosol, nucleus, plastid | 38.05 | 42.16 |
| Bra005499.1-P | Field mustard | cytosol, nucleus, plastid | 35.4 | 41.67 |
| CDX79525 | Canola | cytosol, nucleus, plastid | 32.74 | 40.66 |
| CDY17170 | Canola | cytosol, nucleus, plastid | 37.17 | 40.38 |
| CDY19489 | Canola | cytosol, nucleus, plastid | 36.28 | 39.42 |
| PGSC0003DMT400044192 | Potato | nucleus | 33.63 | 39.18 |
| Solyc09g090540.2.1 | Tomato | nucleus | 33.63 | 39.18 |
| CDY18728 | Canola | nucleus | 30.09 | 18.99 |
Protein Annotations
| EMBL:ACUP02012605 | EnsemblPlants:KRG90361 | EnsemblPlantsGene:GLYMA_20G086200 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009642 |
| InterPro:OHP2 | PANTHER:PTHR33401 | PANTHER:PTHR33401:SF2 | ProteinID:KRG90361 | ProteinID:KRG90361.1 | UniParc:UPI00023DBF7E |
| UniProt:I1NEQ0 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:32074694..32078790
Molecular Weight (calculated)
12782.2 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.728
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDVNGCL MDKHKPVVAS SLVCEKVEDH VNGEDDSDSN SLLPPRRGGM SRNCEKTRRK VQWNDRNGNK LAEVLEYEPR GHCCDLPTLI MTKTRQLGKF
101: DLCCVFEVGR TVQ
101: DLCCVFEVGR TVQ
1: MDTGRGEGKE ANGCENKAIV SLNSSEIEDQ IFEEEESESQ CLLPPRKGGM SRSTDKIKRT VQWNDIKGDN LAEVLVYEPS SYLNVNDLQM RDSYRKP
Arabidopsis Description
Putative uncharacterized protein At2g33390 [Source:UniProtKB/TrEMBL;Acc:O22789]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.