Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92271 | Soybean | nucleus | 92.59 | 91.74 |
| KRH33624 | Soybean | cytosol, nucleus, plastid | 62.96 | 69.39 |
| VIT_05s0049g01730.t01 | Wine grape | cytosol, nucleus, plastid | 50.93 | 59.78 |
| AT2G33390.1 | Thale cress | cytosol, extracellular, nucleus | 50.0 | 55.1 |
| PGSC0003DMT400044192 | Potato | nucleus | 48.15 | 53.61 |
| CDX84690 | Canola | cytosol, nucleus, plastid | 44.44 | 53.33 |
| Solyc09g090540.2.1 | Tomato | nucleus | 47.22 | 52.58 |
| Bra022937.1-P | Field mustard | cytosol, nucleus, plastid | 43.52 | 52.22 |
| CDX79525 | Canola | cytosol, nucleus, plastid | 43.52 | 51.65 |
| CDY23741 | Canola | cytosol, nucleus, plastid | 46.3 | 49.02 |
| KRG90361 | Soybean | cytosol, nucleus, plastid | 50.0 | 47.79 |
| CDY17170 | Canola | cytosol, nucleus, plastid | 45.37 | 47.12 |
| CDY19489 | Canola | cytosol, nucleus, plastid | 45.37 | 47.12 |
| Bra021848.1-P | Field mustard | cytosol, nucleus, plastid | 36.11 | 45.88 |
| Bra005499.1-P | Field mustard | cytosol, nucleus, plastid | 35.19 | 39.58 |
| CDY18728 | Canola | nucleus | 41.67 | 25.14 |
Protein Annotations
| EMBL:ACUP02006607 | EnsemblPlants:KRH34540 | EnsemblPlantsGene:GLYMA_10G189800 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009642 |
| InterPro:OHP2 | PANTHER:PTHR33401 | PANTHER:PTHR33401:SF2 | ProteinID:KRH34540 | ProteinID:KRH34540.1 | SEG:seg |
| UniParc:UPI00023CE4CF | UniProt:I1LCE6 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:42281667..42284249
Molecular Weight (calculated)
12101.2 Da
IEP (calculated)
4.792
GRAVY (calculated)
-1.016
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTKKSTKDT NGCVNKPMAL TMTLTVASLE GRKVEDRNKE DDSDSNSLLP LRKGGISRKS DKTYRKRKVQ WNDRIGNKLV EVLEYEPSDV SDSEDEDDGG
101: DPCICSIM
101: DPCICSIM
1: MDTGRGEGKE ANGCENKAIV SLNSSEIEDQ IFEEEESESQ CLLPPRKGGM SRSTDKIKRT VQWNDIKGDN LAEVLVYEPS EVSDTEDDDS DSCICTIM
Arabidopsis Description
Putative uncharacterized protein At2g33390 [Source:UniProtKB/TrEMBL;Acc:O22789]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.