Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22653 | Soybean | nucleus | 60.85 | 80.86 |
| KRH34662 | Soybean | cytosol | 9.33 | 50.55 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 38.54 | 48.97 |
| Solyc06g074170.2.1 | Tomato | nucleus | 37.32 | 44.99 |
| PGSC0003DMT400015077 | Potato | nucleus | 36.92 | 44.61 |
| PGSC0003DMT400050482 | Potato | nucleus | 36.51 | 41.86 |
| AT3G44290.1 | Thale cress | cytosol | 28.19 | 41.49 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 28.19 | 41.0 |
| Bra021471.1-P | Field mustard | cytosol, golgi, nucleus | 27.79 | 40.53 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 27.59 | 40.24 |
| CDX92368 | Canola | cytosol | 26.77 | 39.4 |
| CDX70995 | Canola | cytosol | 26.37 | 38.92 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 35.5 | 38.72 |
| Bra002403.1-P | Field mustard | cytosol | 25.36 | 38.58 |
| AT5G22290.1 | Thale cress | cytosol | 26.57 | 38.53 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 26.77 | 38.48 |
| CDX88803 | Canola | cytosol | 26.17 | 38.28 |
| Bra020182.1-P | Field mustard | cytosol | 26.57 | 38.19 |
| CDY09128 | Canola | cytosol | 26.57 | 38.19 |
| Bra006619.1-P | Field mustard | cytosol | 25.96 | 37.98 |
| CDY34716 | Canola | nucleus | 21.7 | 36.39 |
| KRH09473 | Soybean | nucleus | 17.04 | 31.82 |
| KRH38928 | Soybean | nucleus | 17.04 | 31.7 |
| KRH13792 | Soybean | nucleus | 18.46 | 26.22 |
| KRH43662 | Soybean | nucleus | 18.46 | 26.15 |
| KRH04320 | Soybean | nucleus | 18.05 | 26.02 |
| KRH58218 | Soybean | nucleus | 17.85 | 25.51 |
| KRH43549 | Soybean | cytosol | 15.42 | 23.53 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 13.39 | 20.82 |
| KRH72602 | Soybean | nucleus | 21.91 | 18.34 |
| KRH16970 | Soybean | nucleus | 21.91 | 18.31 |
| KRH64046 | Soybean | nucleus | 17.85 | 18.22 |
| KRH53649 | Soybean | nucleus | 21.91 | 18.06 |
| KRH64275 | Soybean | nucleus | 21.7 | 17.74 |
| KRH34660 | Soybean | plastid | 16.63 | 17.63 |
| KRG92124 | Soybean | nucleus | 16.43 | 17.42 |
| KRH53893 | Soybean | nucleus | 17.44 | 17.1 |
| KRG91745 | Soybean | nucleus | 18.66 | 16.76 |
| KRH35027 | Soybean | nucleus | 18.66 | 16.43 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 19.68 | 15.06 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 19.27 | 14.77 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 20.08 | 14.6 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 19.68 | 14.43 |
| KRG92121 | Soybean | cytosol | 17.24 | 14.07 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A0R0HGS9 | EMBL:ACUP02007730 | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G186900 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR003441 |
| InterPro:IPR036093 | EnsemblPlants:KRH26664 | ProteinID:KRH26664 | ProteinID:KRH26664.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF40 | SUPFAM:SSF101941 | TMHMM:TMhelix |
| UniParc:UPI0006EDDC0F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:34753427..34763019
Molecular Weight (calculated)
56121.0 Da
IEP (calculated)
9.228
GRAVY (calculated)
-0.552
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVSREAQM SIAASSMFPG FRFCPTDEEL ISYYLRKKMD GHQESVQVIS EVELCKYEPW DLPAKSFIQS DNEWFFFSPR GRKYPKGSQS KRATECGYWK
101: ATGKERNVKS GSNVIGTKRT LVFHLGRAPK GERTEWIMHE YCINEKSQDS LVICRLKKNT EFRLGDSSNR ASSSQRHPVG CSSKRDSCSY GSPSMEQIDS
201: VSEPNQRPVS EATLAVSSGQ PKERYEEDCY AEILKDDIIK LDESSISVEG HTRPQDPIQM HPSPQGTSQR RIRLRVGNSK HSPAVVRFPC TMHSSKSTFF
301: ARITISLVVF PFFVFTLTVL YFLSLVGGNK QKVERERNIE LQFCSRVTLV SIAGKESPIF QHCVTRFVPN SVHNLLFPLS PNLPLGTRRY LSIMNLGLPR
401: SHPSFEWKQQ LVADVDSNPS VSQKQHQISK AGETVKEKII LVQEKNIRRL NELVRHLQEQ LQQCRGRNGT INGTVSPLAE RILELERQQI LED
101: ATGKERNVKS GSNVIGTKRT LVFHLGRAPK GERTEWIMHE YCINEKSQDS LVICRLKKNT EFRLGDSSNR ASSSQRHPVG CSSKRDSCSY GSPSMEQIDS
201: VSEPNQRPVS EATLAVSSGQ PKERYEEDCY AEILKDDIIK LDESSISVEG HTRPQDPIQM HPSPQGTSQR RIRLRVGNSK HSPAVVRFPC TMHSSKSTFF
301: ARITISLVVF PFFVFTLTVL YFLSLVGGNK QKVERERNIE LQFCSRVTLV SIAGKESPIF QHCVTRFVPN SVHNLLFPLS PNLPLGTRRY LSIMNLGLPR
401: SHPSFEWKQQ LVADVDSNPS VSQKQHQISK AGETVKEKII LVQEKNIRRL NELVRHLQEQ LQQCRGRNGT INGTVSPLAE RILELERQQI LED
001: MSKEAEMSIA VSALFPGFRF SPTDVELISY YLRRKIDGDE NSVAVIAEVE IYKFEPWDLP EESKLKSENE WFYFCARGRK YPHGSQSRRA TQLGYWKATG
101: KERSVKSGNQ VVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGAPQDALVV CRLRKNADFR ASSTQKMEDG VVQDDGYVGQ RGGLEKEDKS YYESEHQIPN
201: GDIAESSNVV EDQADTDDDC YAEILNDDII KLDEEALKAS QAFRPTNPTH QETISSESSS KRSKCGIKKE STETMNCYAL FRIKNVAGTD SSWRFPNPFK
301: IKKDDSQRLM KNVLATTVFL AILFSFFWTV LIARN
101: KERSVKSGNQ VVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGAPQDALVV CRLRKNADFR ASSTQKMEDG VVQDDGYVGQ RGGLEKEDKS YYESEHQIPN
201: GDIAESSNVV EDQADTDDDC YAEILNDDII KLDEEALKAS QAFRPTNPTH QETISSESSS KRSKCGIKKE STETMNCYAL FRIKNVAGTD SSWRFPNPFK
301: IKKDDSQRLM KNVLATTVFL AILFSFFWTV LIARN
Arabidopsis Description
NTL8NAC domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.