Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12150 | Soybean | plasma membrane | 74.94 | 85.2 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 53.07 | 62.79 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 54.3 | 61.9 |
| PGSC0003DMT400086024 | Potato | cytosol, endoplasmic reticulum, extracellular | 21.13 | 60.99 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 59.71 | 60.6 |
| KRH12149 | Soybean | plasma membrane | 59.95 | 60.4 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 60.44 | 60.15 |
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 22.36 | 57.23 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 53.56 | 57.07 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 19.9 | 56.25 |
| AT1G30840.1 | Thale cress | peroxisome, plasma membrane, vacuole | 51.6 | 54.97 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 53.56 | 54.77 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 54.79 | 54.26 |
| Bra023144.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 51.6 | 53.71 |
| Bra023141.1-P | Field mustard | plasma membrane | 51.6 | 53.71 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 55.04 | 52.83 |
| CDY09533 | Canola | plasma membrane | 41.52 | 52.81 |
| CDY02338 | Canola | plasma membrane | 41.52 | 52.81 |
| CDY09527 | Canola | plasma membrane | 41.28 | 52.5 |
| GSMUA_Achr6P30590_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 41.03 | 48.55 |
| TraesCS3B01G300900.1 | Wheat | plastid | 42.01 | 45.0 |
| GSMUA_Achr3P16440_001 | Banana | extracellular, peroxisome, plastid | 41.52 | 44.71 |
| TraesCS3A01G267500.1 | Wheat | plastid | 41.77 | 44.39 |
| TraesCS3D01G267700.1 | Wheat | plastid | 41.52 | 44.13 |
| EES18657 | Sorghum | mitochondrion | 36.85 | 43.48 |
| GSMUA_Achr9P06170_001 | Banana | cytosol | 40.05 | 43.35 |
| Os01t0680200-01 | Rice | cytosol, plasma membrane, vacuole | 40.29 | 42.38 |
| HORVU3Hr1G062690.1 | Barley | plastid | 41.52 | 42.25 |
| Zm00001d038965_P001 | Maize | mitochondrion, plastid | 37.84 | 42.08 |
| Zm00001d043858_P001 | Maize | vacuole | 40.29 | 41.41 |
| EES01264 | Sorghum | plasma membrane | 39.31 | 41.34 |
| Zm00001d011603_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 39.07 | 41.3 |
| OQU78406 | Sorghum | plastid | 37.1 | 40.92 |
| GSMUA_Achr8P27440_001 | Banana | mitochondrion | 42.51 | 40.9 |
| Os01t0504100-01 | Rice | plasma membrane | 37.1 | 39.84 |
| TraesCS1B01G413400.1 | Wheat | plastid | 36.36 | 39.05 |
| TraesCS1D01G393900.1 | Wheat | plastid | 37.59 | 38.83 |
| TraesCS1A01G386000.1 | Wheat | plastid | 35.87 | 38.83 |
| TraesCS1D01G394000.1 | Wheat | plastid | 36.12 | 38.79 |
| Os05t0556800-01 | Rice | mitochondrion | 36.12 | 38.38 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 35.63 | 38.36 |
| HORVU1Hr1G085120.1 | Barley | plastid | 37.59 | 38.25 |
| TraesCS1A01G385800.1 | Wheat | plastid | 37.59 | 37.87 |
| TraesCS1B01G413500.1 | Wheat | plastid | 37.35 | 37.62 |
| TraesCS1A01G386100.1 | Wheat | plastid | 37.1 | 37.38 |
| TraesCS1D01G394100.1 | Wheat | plastid | 36.61 | 36.88 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 36.61 | 36.61 |
| TraesCS1B01G413300.1 | Wheat | mitochondrion | 37.35 | 36.02 |
| KRH72416 | Soybean | endoplasmic reticulum, plasma membrane | 29.98 | 35.47 |
| HORVU1Hr1G085150.1 | Barley | plastid | 36.61 | 35.14 |
| KRH62277 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 28.99 | 33.05 |
| KRH52994 | Soybean | cytosol, nucleus, plasma membrane | 27.52 | 32.46 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 27.52 | 30.94 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 27.27 | 30.41 |
| KRH57573 | Soybean | plasma membrane | 27.03 | 30.22 |
| KRH04294 | Soybean | plasma membrane | 28.01 | 29.23 |
| KRH45390 | Soybean | plasma membrane | 21.87 | 27.81 |
| KRH04293 | Soybean | plasma membrane | 24.08 | 27.37 |
| KRH13483 | Soybean | plasma membrane | 20.64 | 27.36 |
| KRH54954 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 23.83 | 26.87 |
| KRH26102 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 23.83 | 26.72 |
| KRH21843 | Soybean | mitochondrion | 27.52 | 26.67 |
| KRH57570 | Soybean | plasma membrane | 23.59 | 24.62 |
| KRH46353 | Soybean | plasma membrane | 24.08 | 23.61 |
| KRG98518 | Soybean | plasma membrane | 23.83 | 23.43 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, golgi | 0.74 | 2.56 |
Protein Annotations
| EMBL:ACUP02005419 | EnsemblPlants:KRH37149 | EnsemblPlantsGene:GLYMA_09G047600 | EntrezGene:100795076 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant |
| PANTHER:PTHR31376 | PANTHER:PTHR31376:SF3 | PFAM:PF16913 | ProteinID:KRH37149 | ProteinID:KRH37149.1 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000233CA7C | UniProt:A0A0R0I3V1 | MapMan:24.2.1.6 | : |
Description
hypothetical protein
Coordinates
chr9:-:4101702..4103198
Molecular Weight (calculated)
45670.8 Da
IEP (calculated)
7.710
GRAVY (calculated)
0.248
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVKSQSPPL HHQFLSTTPN DYTSDIESID QEGPESLSNP TPFMENTEQH HHEDQKSMKN KRYKFLLFIN YVLLFVGSVS SSLLTKYYFN HKGSSKWVST
101: WVQCAGFPFL IIPIFLPSLL NYTERKPFTD FTPKMLCYSF CIGVMLGFNN LLYSFGVAYL PVSTSALLLS SQLVFTLILS AIIVKQKITF SNLNSVILIT
201: MSSIILALNS SHEKPQGLTQ KDYFIGFSCT IGAGLLFSLY LPLMEKIYER VYCYGMVMEM QLVMEIAATV LATGGMVYKG GFSEMKEEAD RVFDKGNTFY
301: WVTVVLSVVT WQCCFMGTAG MVFLTSSLTG GVSATALLSM NVLAGWLVYH DAFKGFKIVA TVLCIWGFCS YVYGMYIKRE QEEEAKRRNS SGGTTTELIP
401: NGNRMVV
101: WVQCAGFPFL IIPIFLPSLL NYTERKPFTD FTPKMLCYSF CIGVMLGFNN LLYSFGVAYL PVSTSALLLS SQLVFTLILS AIIVKQKITF SNLNSVILIT
201: MSSIILALNS SHEKPQGLTQ KDYFIGFSCT IGAGLLFSLY LPLMEKIYER VYCYGMVMEM QLVMEIAATV LATGGMVYKG GFSEMKEEAD RVFDKGNTFY
301: WVTVVLSVVT WQCCFMGTAG MVFLTSSLTG GVSATALLSM NVLAGWLVYH DAFKGFKIVA TVLCIWGFCS YVYGMYIKRE QEEEAKRRNS SGGTTTELIP
401: NGNRMVV
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.