Subcellular Localization
min:
: max
Winner_takes_all: extracellular, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- golgi 2
- plastid 2
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P10230_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30840.1 | GSMUA_Achr4P10230_001 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P06170_001 | Banana | cytosol | 75.66 | 76.06 |
| GSMUA_Achr8P27440_001 | Banana | mitochondrion | 76.98 | 68.79 |
| GSMUA_Achr6P30590_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 54.76 | 60.17 |
| PGSC0003DMT400086024 | Potato | cytosol, endoplasmic reticulum, extracellular | 20.63 | 55.32 |
| Os01t0504100-01 | Rice | plasma membrane | 54.23 | 54.09 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 49.47 | 52.38 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 46.83 | 51.45 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 19.31 | 50.69 |
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 20.9 | 49.69 |
| AT1G30840.1 | Thale cress | peroxisome, plasma membrane, vacuole | 48.41 | 47.91 |
| Bra023141.1-P | Field mustard | plasma membrane | 48.94 | 47.31 |
| Bra023144.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 48.94 | 47.31 |
| CDY02338 | Canola | plasma membrane | 39.68 | 46.88 |
| CDY09533 | Canola | plasma membrane | 39.15 | 46.25 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 46.56 | 46.07 |
| CDY09527 | Canola | plasma membrane | 38.89 | 45.94 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 49.74 | 45.74 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 48.15 | 45.73 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 50.79 | 45.28 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 46.83 | 44.14 |
| KRH12150 | Soybean | plasma membrane | 41.27 | 43.58 |
| KRH12149 | Soybean | plasma membrane | 46.03 | 43.07 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 46.3 | 42.79 |
| KRH37149 | Soybean | plasma membrane | 44.71 | 41.52 |
| GSMUA_Achr5P24450_001 | Banana | plasma membrane | 30.95 | 31.79 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 23.81 | 29.8 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 25.93 | 28.08 |
| GSMUA_Achr10P... | Banana | plasma membrane | 31.22 | 24.03 |
| GSMUA_Achr1P26440_001 | Banana | plasma membrane | 14.29 | 19.78 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, golgi | 0.53 | 1.71 |
Protein Annotations
| MapMan:24.2.1.6 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr3G16440_001 | EnsemblPlants:GSMUA_Achr3P16440_001 | EnsemblPlants:GSMUA_Achr3T16440_001 | UniProt:M0SF60 |
| PFAM:PF16913 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF3 | InterPro:PUP_plant | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI000295FCA3 | SEG:seg | : | : | : | : |
Description
Probable purine permease 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G16440_001]
Coordinates
chr3:-:17741228..17742364
Molecular Weight (calculated)
40136.7 Da
IEP (calculated)
8.188
GRAVY (calculated)
0.472
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MEILSPKRSS RSQLGHESGG GDAADSAVAV SETVNQRSRS NTLLLAANYM ILFLGSLSSS LLSRFYFVHG GSNRWVETLV QSAGFPLLLL PIYLTPSPSS
101: RPFSGFSRRL VYVSLLLGLL LGVNNLLFSC GVSYLSVSTS SLLLSSQLGF TLLLSALLVR HPLTFSSLNC VVLLTLSSVL LALNSSGDRP PGVDRGHFFL
201: GFAATLGAAG LFAVYLPVTQ LVYRGVSGYR MVVEVQLLME AAATALAATG MAASGGWRKE GAWDLGGARY WTVVAATVVG WQFCFMGTAG MVFLTSSVNS
301: VICMTALLSV NVLGGVLVFG DEFGGGKAVA LVLCLWAFSS YLYGEYKKKK DEAVMAMEEG KETERRESSE VTGGDNSA
101: RPFSGFSRRL VYVSLLLGLL LGVNNLLFSC GVSYLSVSTS SLLLSSQLGF TLLLSALLVR HPLTFSSLNC VVLLTLSSVL LALNSSGDRP PGVDRGHFFL
201: GFAATLGAAG LFAVYLPVTQ LVYRGVSGYR MVVEVQLLME AAATALAATG MAASGGWRKE GAWDLGGARY WTVVAATVVG WQFCFMGTAG MVFLTSSVNS
301: VICMTALLSV NVLGGVLVFG DEFGGGKAVA LVLCLWAFSS YLYGEYKKKK DEAVMAMEEG KETERRESSE VTGGDNSA
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [plasma membrane,peroxisome,vacuole]
SUBAcon: [plasma membrane,peroxisome,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.