Factsheet for GSMUA_Achr8P27440_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30840.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P16440_001	Banana	extracellular, peroxisome, plastid	68.79	76.98
GSMUA_Achr9P06170_001	Banana	cytosol	64.07	72.07
GSMUA_Achr6P30590_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	47.75	58.72
Os01t0504100-01	Rice	plasma membrane	47.75	53.3
PGSC0003DMT400086024	Potato	cytosol, endoplasmic reticulum, extracellular	17.49	52.48
Solyc10g005160.1.1	Tomato	plasma membrane	43.03	50.98
VIT_18s0089g01410.t01	Wine grape	plasma membrane	41.13	50.58
PGSC0003DMT400090756	Potato	endoplasmic reticulum, extracellular, vacuole	16.31	47.92
PGSC0003DMT400090938	Potato	endoplasmic reticulum, extracellular	17.73	47.17
Bra023141.1-P	Field mustard	plasma membrane	43.03	46.55
Bra023144.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	43.03	46.55
AT1G30840.1	Thale cress	peroxisome, plasma membrane, vacuole	41.84	46.34
KRH37148	Soybean	cytosol, peroxisome, plasma membrane	43.74	46.13
Solyc10g005150.1.1	Tomato	plasma membrane	41.37	45.81
CDY02338	Canola	plasma membrane	34.52	45.62
CDY09533	Canola	plasma membrane	34.28	45.31
KRH12149	Soybean	plasma membrane	43.03	45.05
CDY09527	Canola	plasma membrane	34.04	45.0
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	42.32	44.97
KRH37147	Soybean	nucleus, peroxisome, plasma membrane	43.26	44.74
Solyc02g082170.1.1	Tomato	plasma membrane	43.03	44.28
KRH12150	Soybean	plasma membrane	37.35	44.13
PGSC0003DMT400035529	Potato	cytosol, mitochondrion, peroxisome, plastid	43.26	43.16
KRH37149	Soybean	plasma membrane	40.9	42.51
GSMUA_Achr5P24450_001	Banana	plasma membrane	26.95	30.98
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	21.04	29.47
GSMUA_Achr5P12690_001	Banana	plasma membrane	23.17	28.08
GSMUA_Achr10P...	Banana	plasma membrane	29.79	25.66
GSMUA_Achr1P26440_001	Banana	plasma membrane	13.0	20.15
GSMUA_Achr10P...	Banana	cytosol, extracellular, golgi	2.36	8.55

Protein Annotations

MapMan:24.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr8G27440_001	EnsemblPlants:GSMUA_Achr8P27440_001	EnsemblPlants:GSMUA_Achr8T27440_001	UniProt:M0TU47
PFAM:PF16913	PANTHER:PTHR31376	PANTHER:PTHR31376:SF3	InterPro:PUP_plant	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI000295D675	SEG:seg	:	:	:	:

Description

Probable purine permease 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G27440_001]

Coordinates

chr8:+:30602734..30604005

Molecular Weight (calculated)

45371.2 Da

IEP (calculated)

8.853

GRAVY (calculated)

0.341

Length

423 amino acids

Sequence
(BLAST)

001: MCTVQQKACQ PTLIRRKRSL GGVFPRQEHG SDPPLASPPL DPRLMANLAP KEANRPRLDE ESRGGEVAEA ALATREAGNR WWRSRKLLLA ANYTILFVGS
101: LSSSLLSRYY FVHGGSNRWV STLVQSAGFP FLLLPICLAS SPSSRPFSGL TPRLLYLSLF VGLLLGVNNL LFSCSVSYLS VSTSSLLLSS QLGFTLLLSA
201: LLVRHPLTFS NLNCVVLLTL SSVLLALNSK HDRPDGVDRA HFFLGFAATL GAAGLFAVYL PLMQLVYREV SGYRMVVEVQ VLMEAAATAL AATGMFATGG
301: WRREGKWNLG VARYWVVVAA TVAAWQLCFL GTAGMVYLTS SVNSGICMTA LLSVNVVGGV LVFGDAFGGG KAVAMALCIW SFSSYLYGEY KKKKEEEVVV
401: AAEIAEGKEE DDSGGSAAGD GNA

Best Arabidopsis Sequence Match ( AT1G30840.1 )
(BLAST)

001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA

Arabidopsis Description

PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [plasma membrane,peroxisome,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.