Factsheet for GSMUA_Achr5P12690_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
plasma membrane 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09100_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT5G41160.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT5G41160.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT5G41160.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT5G41160.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT5G41160.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT5G41160.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	54.73	63.24
Zm00001d051504_P001	Maize	golgi, peroxisome, plasma membrane	67.34	61.2
Os02t0689200-03	Rice	plasma membrane	66.76	60.52
TraesCS6A01G262900.1	Wheat	plasma membrane	65.62	58.72
TraesCS6B01G289900.1	Wheat	peroxisome	65.33	58.61
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	60.46	58.29
TraesCS6D01G243400.1	Wheat	golgi, peroxisome, plasma membrane	64.76	57.95
CDY12545	Canola	plasma membrane	49.0	57.38
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	59.6	56.99
EES11332	Sorghum	peroxisome	59.89	55.88
Zm00001d002515_P001	Maize	peroxisome	59.03	55.38
HORVU6Hr1G066740.2	Barley	golgi, mitochondrion	65.9	55.02
VIT_15s0021g00650.t01	Wine grape	plastid	59.6	54.74
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	46.7	54.52
AT1G44750.1	Thale cress	plasma membrane	59.03	54.35
HORVU2Hr1G105300.1	Barley	peroxisome	58.17	54.28
TraesCS2D01G452400.1	Wheat	peroxisome	57.88	54.01
TraesCS2B01G474100.1	Wheat	peroxisome	57.88	54.01
TraesCS5A01G413800.1	Wheat	peroxisome	57.31	53.48
TraesCS2A01G452600.1	Wheat	peroxisome	56.73	52.94
VIT_19s0014g00150.t01	Wine grape	plasma membrane	57.31	52.77
Bra037874.1-P	Field mustard	plasma membrane	50.43	52.69
PGSC0003DMT400004320	Potato	plasma membrane	55.59	52.57
Solyc01g088550.2.1	Tomato	plasma membrane	54.73	52.47
KRH13483	Soybean	plasma membrane	45.27	51.47
AT4G08700.1	Thale cress	plasma membrane	51.0	49.31
Bra036955.1-P	Field mustard	plasma membrane	58.17	48.92
CDY14989	Canola	plasma membrane	57.88	48.67
CDX71327	Canola	plasma membrane	57.59	48.32
EES05697	Sorghum	plastid	68.77	47.9
CDX75141	Canola	plasma membrane	45.56	47.89
AT5G41160.1	Thale cress	plasma membrane	49.86	47.8
CDY54350	Canola	plasma membrane	45.27	47.59
KRH21843	Soybean	mitochondrion	52.72	43.81
HORVU5Hr1G019740.1	Barley	cytosol, plastid	29.8	31.23
GSMUA_Achr6P30590_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	30.09	30.52
GSMUA_Achr5P24450_001	Banana	plasma membrane	32.09	30.43
GSMUA_Achr9P06170_001	Banana	cytosol	29.23	27.13
GSMUA_Achr1P26440_001	Banana	plasma membrane	20.63	26.37
GSMUA_Achr3P16440_001	Banana	extracellular, peroxisome, plastid	28.08	25.93
GSMUA_Achr8P27440_001	Banana	mitochondrion	28.08	23.17
GSMUA_Achr10P...	Banana	plasma membrane	31.81	22.61
GSMUA_Achr10P...	Banana	cytosol, extracellular, golgi	0.29	0.85

Protein Annotations

EnsemblPlants:GSMUA_Achr5P12690_001	EnsemblPlants:GSMUA_Achr5T12690_001	EnsemblPlantsGene:GSMUA_Achr5G12690_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF2	PFAM:PF16913	SEG:seg	TMHMM:TMhelix	UniParc:UPI00029578D5	UniProt:M0SXZ8
MapMan:24.2.1.6	:	:	:	:	:

Description

Probable purine permease 11 [Source:GMGC_GENE;Acc:GSMUA_Achr5G12690_001]

Coordinates

chr5:+:9099595..9101482

Molecular Weight (calculated)

38378.1 Da

IEP (calculated)

8.660

GRAVY (calculated)

0.529

Length

349 amino acids

Sequence
(BLAST)

001: MDELDKMELH MTGPSKSATE ADRPPPPSSR LRSWQWWFIV ALNIFFLLAG QTAATLLGRF YYDQGGNSKW MATLVQTAGF PILCLPLFLF PSTHPPPATS
101: IIPHPSHAKI ALVYVILGLI IAADNLMYSY GLLYLPVSTY SLVCATQLAF NAVFSYYLNS QKFTAFIMNS GKYAIGFILT LGASATYSLI LSLMQLTFQK
201: VIRKETFSAV LEMQIYTAFV ASCAAVVGLL ASGEWKDLKS EMEAYGKGTV SYVMTLVWTG LSWQVASVGV VGLIFVVSSL FSNVISTLAL PVVPVFAVIF
301: FHDKMNGVKI VAMLIAIWGF ASYLYQHYLD DSKAKKTVGH TEYVPAHGS

Best Arabidopsis Sequence Match ( AT1G44750.2 )
(BLAST)

001: MSGNQEPILV KEESVVGIPT PLLKLKSWQW WVLVSVNIFF LIGGQAASVL LGRFYYDEGG NSKWMATLVQ TAAFPILYIP LLLLPSSASV ESSESSCSLK
101: YIVLIYVLLG VIIAGDNMLY SVGLLYLSAS TYSLICATQL AFNAVFSYFI NAQKFTALIL NSVVLLSFSA ALIALNDDAD TPSGVSRSKY IVGFVCTLAA
201: SALYSLLLSL MQFSFEKILK RETFSVVLEM QIYTSLVATC VSVIGLFASG EWRTLHGEME GYHKGQASYV LTLVWTAVTW QVCSVGVVGL IFLVTSLFSN
301: VISTLSLAVT PLAALVVFRD KMSGVKIMAM LIAIWGFASY VYQNHIDDLK VRQARQQAQA GRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.