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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 89.93 89.63
AT1G44750.1 Thale cress plasma membrane 92.28 72.56
CDY14989 Canola plasma membrane 96.98 69.64
CDX71327 Canola plasma membrane 96.98 69.47
KRH40250 Soybean endoplasmic reticulum, plasma membrane, vacuole 71.81 59.12
KRH00977 Soybean endoplasmic reticulum, plasma membrane, vacuole 71.14 58.08
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 52.68 51.99
PGSC0003DMT400004320 Potato plasma membrane 64.09 51.76
Solyc01g088550.2.1 Tomato plasma membrane 63.09 51.65
VIT_15s0021g00650.t01 Wine grape plastid 65.77 51.58
GSMUA_Achr5P12690_001 Banana plasma membrane 57.38 49.0
CDY54350 Canola plasma membrane 52.68 47.29
CDX75141 Canola plasma membrane 52.01 46.69
Zm00001d051504_P001 Maize golgi, peroxisome, plasma membrane 59.06 45.83
Zm00001d003417_P001 Maize endoplasmic reticulum, extracellular, vacuole 47.99 45.69
Os02t0689200-03 Rice plasma membrane 58.72 45.45
TraesCS6B01G289900.1 Wheat peroxisome 57.05 43.7
TraesCS6D01G243400.1 Wheat golgi, peroxisome, plasma membrane 56.71 43.33
TraesCS6A01G262900.1 Wheat plasma membrane 56.38 43.08
HORVU2Hr1G105300.1 Barley peroxisome 54.03 43.05
TraesCS2B01G474100.1 Wheat peroxisome 53.69 42.78
TraesCS2D01G452400.1 Wheat peroxisome 53.69 42.78
TraesCS5A01G413800.1 Wheat peroxisome 53.02 42.25
Zm00001d002515_P001 Maize peroxisome 52.68 42.2
Os09t0548600-00 Rice endoplasmic reticulum, extracellular, vacuole 48.99 42.2
TraesCS2A01G452600.1 Wheat peroxisome 52.68 41.98
EES11332 Sorghum peroxisome 52.35 41.71
TraesCS2B01G473900.1 Wheat plasma membrane 52.68 41.21
TraesCS2B01G473800.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.65 41.16
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 57.38 40.91
TraesCS2D01G452200.1 Wheat plasma membrane 52.01 40.68
TraesCS2A01G452400.1 Wheat plasma membrane 52.01 40.58
TraesCS2D01G452300.1 Wheat peroxisome 51.68 40.21
EES11334 Sorghum peroxisome 51.01 39.9
CDY08900 Canola plasma membrane 41.61 39.87
HORVU2Hr1G105340.1 Barley golgi, peroxisome, plasma membrane 51.34 39.13
TraesCS2A01G452500.1 Wheat peroxisome 50.34 38.76
Zm00001d002514_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 49.33 38.48
KXG27004 Sorghum golgi, peroxisome, vacuole 50.67 38.32
CDX78835 Canola plasma membrane 50.0 38.11
CDX99493 Canola plasma membrane 50.0 38.01
CDY08897 Canola plasma membrane 49.66 37.85
CDX76538 Canola plasma membrane 49.66 37.76
CDY08899 Canola cytosol, peroxisome, plasma membrane 49.33 37.69
CDX76537 Canola plasma membrane 49.33 37.69
HORVU2Hr1G105360.5 Barley peroxisome 51.68 37.38
CDX90414 Canola plasma membrane 46.98 37.33
KXG26473 Sorghum cytosol, peroxisome, plasma membrane 48.66 37.18
HORVU2Hr1G105240.3 Barley peroxisome 51.34 37.14
CDY01525 Canola plasma membrane 46.64 36.77
TraesCS2D01G452100.1 Wheat plasma membrane 47.99 36.48
EES05697 Sorghum plastid 59.4 35.33
CDY08895 Canola plasma membrane 46.64 35.19
CDX76540 Canola plasma membrane 46.31 34.76
KXG24673 Sorghum peroxisome 47.65 34.63
EES10997 Sorghum plasma membrane 48.32 34.53
CDX76536 Canola plasma membrane 33.89 34.47
TraesCS2B01G474000.1 Wheat cytosol, peroxisome, plasma membrane 51.68 34.45
TraesCS2A01G452300.1 Wheat mitochondrion 48.32 32.95
CDX78833 Canola cytosol, extracellular, plasma membrane 47.99 29.73
CDY27947 Canola plasma membrane 34.23 29.23
CDY17197 Canola extracellular, plasma membrane 33.89 28.77
CDY46618 Canola plasma membrane 21.48 28.19
CDY35722 Canola plasma membrane 33.22 27.97
CDX99494 Canola plasma membrane 47.99 27.88
CDY15687 Canola plasma membrane 28.19 27.72
CDY72169 Canola plasma membrane 23.49 27.67
CDX90136 Canola plasma membrane 32.55 27.56
CDX94595 Canola plasma membrane 31.88 27.22
CDX94594 Canola extracellular, plasma membrane 31.54 26.93
CDY35721 Canola plasma membrane 28.19 26.33
CDY12422 Canola plasma membrane 33.22 26.33
CDX90135 Canola plasma membrane 28.52 26.32
CDY29741 Canola plasma membrane 33.22 26.26
CDY16284 Canola plasma membrane 32.55 25.73
CDX93469 Canola plasma membrane 32.89 25.39
CDY22619 Canola plasma membrane 31.88 25.2
CDX94937 Canola plasma membrane 31.88 25.07
CDY53149 Canola plasma membrane 32.55 24.68
CDY39353 Canola plasma membrane 30.87 24.08
CDY64442 Canola plasma membrane 31.54 24.04
CDY29404 Canola plasma membrane 30.2 23.62
CDY29403 Canola plasma membrane 30.2 23.38
CDY34789 Canola cytosol, peroxisome, plasma membrane 29.53 23.22
CDX76826 Canola cytosol, peroxisome, plasma membrane 29.53 23.22
CDY09527 Canola plasma membrane 24.83 23.12
CDY09533 Canola plasma membrane 24.5 22.81
CDY02338 Canola plasma membrane 24.5 22.81
CDY39352 Canola plasma membrane 29.19 22.31
CDY67986 Canola plasma membrane 27.85 22.25
Zm00001d026042_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 50.0 22.14
CDY29401 Canola plasma membrane 25.5 22.09
CDY63252 Canola extracellular 31.88 21.99
HORVU5Hr1G019740.1 Barley cytosol, plastid 24.5 21.92
CDX96651 Canola plasma membrane 30.87 21.75
CDY31805 Canola plasma membrane 32.21 21.67
CDX73177 Canola plasma membrane 23.83 16.78
CDY63702 Canola plasma membrane 29.19 11.34
CDX96650 Canola cytosol, plasma membrane, vacuole 0.0 0.0
Protein Annotations
EnsemblPlants:CDY12545EnsemblPlantsGene:GSBRNA2T00061933001GO:A0A078FDW5GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF2PFAM:PF16913ProteinID:CDY12545ProteinID:CDY12545.1SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0004EDC17FUniProt:A0A078FDW5MapMan:24.2.1.6::
Description
BnaC06g00710DBnaC06g00710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDW5]
Coordinates
chrLK032024:+:360731..361733
Molecular Weight (calculated)
32096.7 Da
IEP (calculated)
8.115
GRAVY (calculated)
0.830
Length
298 amino acids
Sequence
(BLAST)
001: MATLVQTAAF PILYIPLLLL PSSEPASCSL KTIVLIYVLL GVIIAGDNML YSVGLLYLSA STYSLICATQ LAFNAVFSHF INAQKFTALI LNSVVLLSFS
101: AALIALNDDA DAPSGVSRSK YVVGFVCTLA ASALYSLLLS LLQFSFEKIL KKETFSVVLE MQIYTSLVAT CVAVIGLFAS GEWRTLHGEM EGYHKGQASY
201: VLTLVGTAVS WQVCSVGVVG LIFLVTSLFS NVISTLSLAV TPLAALAVFR DKMSGVKVMA MLIALWGFAS YVYQNHLDDL KVRRARKHAQ AGQLDPHC
Best Arabidopsis Sequence Match ( AT1G44750.3 )
(BLAST)
001: MATLVQTAAF PILYIPLLLL PSSASVESSE SSCSLKYIVL IYVLLGVIIA GDNMLYSVGL LYLSASTYSL ICATQLAFNA VFSYFINAQK FTALILNSVV
101: LLSFSAALIA LNDDADTPSG VSRSKYIVGF VCTLAASALY SLLLSLMQFS FEKILKRETF SVVLEMQIYT SLVATCVSVI GLFASGEWRT LHGEMEGYHK
201: GQASYVLTLV WTAVTWQVCS VGVVGLIFLV TSLFSNVIST LSLAVTPLAA LVVFRDKMSG VKIMAMLIAI WGFASYVYQN HIDDLKVRQA RQQAQAGRVE
301: PPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.