Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76540 Canola plasma membrane 98.99 98.49
Bra040925.1-P Field mustard plasma membrane 95.95 97.18
AT4G18195.1 Thale cress plasma membrane 86.08 86.29
CDX90414 Canola plasma membrane 70.63 74.4
CDY01525 Canola plasma membrane 70.89 74.07
CDY08900 Canola plasma membrane 43.29 54.98
CDX76536 Canola plasma membrane 39.49 53.24
CDX76537 Canola plasma membrane 52.15 52.82
CDY08899 Canola cytosol, peroxisome, plasma membrane 52.15 52.82
CDY08897 Canola plasma membrane 51.14 51.66
KRH45390 Soybean plasma membrane 41.77 51.56
CDX99493 Canola plasma membrane 51.14 51.53
CDX78835 Canola plasma membrane 50.63 51.15
CDX76538 Canola plasma membrane 49.87 50.26
VIT_10s0003g02850.t01 Wine grape plasma membrane 46.84 50.0
KRG98518 Soybean plasma membrane 49.87 47.58
CDY12545 Canola plasma membrane 35.19 46.64
KRH46353 Soybean plasma membrane 48.86 46.51
PGSC0003DMT400025116 Potato plasma membrane 44.81 45.85
Solyc02g071110.2.1 Tomato plasma membrane 43.8 45.65
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 34.43 45.48
PGSC0003DMT400025123 Potato plasma membrane 43.54 43.88
Solyc02g071060.2.1 Tomato plasma membrane 43.29 43.29
VIT_10s0003g02840.t01 Wine grape plasma membrane 45.57 40.82
Solyc02g071080.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid, vacuole 24.81 39.36
PGSC0003DMT400035009 Potato endoplasmic reticulum, extracellular 14.94 39.07
CDY14989 Canola plasma membrane 40.25 38.31
CDX71327 Canola plasma membrane 40.25 38.22
PGSC0003DMT400025125 Potato plasma membrane 37.72 38.01
Solyc02g071100.2.1 Tomato nucleus 35.95 37.87
Solyc02g071050.2.1 Tomato plasma membrane 36.96 37.73
CDY54350 Canola plasma membrane 31.65 37.65
Solyc02g071090.2.1 Tomato plasma membrane 35.44 37.33
CDX78833 Canola cytosol, extracellular, plasma membrane 45.06 37.01
CDX75141 Canola plasma membrane 30.89 36.75
PGSC0003DMT400035010 Potato endoplasmic reticulum, peroxisome, plasma membrane 35.19 36.68
PGSC0003DMT400025122 Potato plasma membrane 34.68 36.34
PGSC0003DMT400025118 Potato plasma membrane 34.43 34.61
CDX99494 Canola plasma membrane 44.56 34.31
Solyc03g005810.2.1 Tomato endoplasmic reticulum, extracellular, plastid 20.25 32.65
Solyc03g005820.2.1 Tomato plasma membrane 34.18 32.14
CDY15687 Canola plasma membrane 24.3 31.68
CDX94595 Canola plasma membrane 27.85 31.52
CDX94594 Canola extracellular, plasma membrane 27.34 30.95
CDX90136 Canola plasma membrane 27.34 30.68
CDY17197 Canola extracellular, plasma membrane 27.09 30.48
CDY27947 Canola plasma membrane 26.84 30.37
CDY35722 Canola plasma membrane 26.58 29.66
CDY12422 Canola plasma membrane 27.09 28.46
CDY29741 Canola plasma membrane 26.84 28.12
CDY16284 Canola plasma membrane 26.84 28.12
CDY72169 Canola plasma membrane 17.72 27.67
CDY29404 Canola plasma membrane 25.57 26.51
CDY02338 Canola plasma membrane 21.27 26.25
CDY39353 Canola plasma membrane 25.06 25.92
CDY09533 Canola plasma membrane 20.76 25.62
CDY09527 Canola plasma membrane 20.76 25.62
CDY29403 Canola plasma membrane 24.81 25.45
CDY29401 Canola plasma membrane 21.77 25.0
CDY39352 Canola plasma membrane 24.56 24.87
CDY64442 Canola plasma membrane 24.56 24.81
CDY46618 Canola plasma membrane 14.18 24.67
CDY67986 Canola plasma membrane 23.29 24.66
CDX90135 Canola plasma membrane 20.0 24.46
CDX76826 Canola cytosol, peroxisome, plasma membrane 23.29 24.27
CDY35721 Canola plasma membrane 19.24 23.82
CDY34789 Canola cytosol, peroxisome, plasma membrane 22.53 23.48
CDY53149 Canola plasma membrane 23.29 23.41
CDY22619 Canola plasma membrane 22.28 23.34
CDX96651 Canola plasma membrane 24.81 23.17
CDY63252 Canola extracellular 25.32 23.15
CDX94937 Canola plasma membrane 21.52 22.43
CDX93469 Canola plasma membrane 21.52 22.02
CDY31805 Canola plasma membrane 23.54 20.99
CDX73177 Canola plasma membrane 20.0 18.68
CDY63702 Canola plasma membrane 24.56 12.65
CDX96650 Canola cytosol, plasma membrane, vacuole 0.51 1.27
Protein Annotations
EnsemblPlants:CDY08895EnsemblPlantsGene:GSBRNA2T00000900001GO:A0A078F2Z6GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantncoils:Coil
PANTHER:PTHR31376PANTHER:PTHR31376:SF17PFAM:PF16913ProteinID:CDY08895ProteinID:CDY08895.1SEG:seg
TMHMM:TMhelixUniParc:UPI0004EDF3B5UniProt:A0A078F2Z6MapMan:24.2.1.6::
Description
BnaC08g11250DBnaC08g11250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2Z6]
Coordinates
chrLK031990:+:329628..330944
Molecular Weight (calculated)
43487.3 Da
IEP (calculated)
9.172
GRAVY (calculated)
0.488
Length
395 amino acids
Sequence
(BLAST)
001: MERTQDLYAN GQQNIEANLA DQEEMNNTME IESSPIPQPK NCKRWLRISI YVFFVLSCQA LSTILGRLYF ENGGKSTWMG TLVQLIGFPV LFLFRFLSKT
101: KTPKSTDTSL RKFPSFITLG SVYIVTGLLV SANSYMSSVG LLYLPVSTFS LILASQLAFT AFFSYFLNSQ KFTPFIVNSL FLLTISSALL VVNTDESQST
201: TNVSSRVKYV IGIICTIGAS AGIGLLLSLV QLILRKVLKN HTVSTVMDLV AYQSLVASCV VLIGLFASGE WKTLTSEMEN YKLGKAPYAI TLASIAISWQ
301: VYTIGVVGLI FESSSVFSNS ITAVGLPIVP VVAVIVFGDK MNTSKIFSII LAIWGFISFV YQHYLDEKKL KISHTNHVGG PRLPVDEGQT NIQIV
Best Arabidopsis Sequence Match ( AT4G18195.1 )
(BLAST)
001: MEITQVIYVN DHNNIEANLT GQEEMNTTME IESSSVPQSK NYKKWLRISI YVFFVLACQA LSTILGRVYY ENGGKSTWMG TLVQLIGFPV LFLFRFFSQT
101: KNPKPTEADF RKFSSFTILG SVYIVTGLLV SANSYMSSVG LLYLPVSTFS LILASQLAFT AFFSYFLNSQ KFTPFIVNSL FLLTISSALL VVNTDSENTA
201: KVSRVKYVIG IICTIGASAG IGLLLSLVQL ILRKVLKKQT FSTVTDLVAY QSLVASCVVL IGLFASGEWK TLTSEMENYK LGKVPYVMTL ASIAISWQVY
301: TIGVVGLIFE SSSVFSNSIT AVGLPIVPVV AVIVFHDKMN ASKIFSIILA IWGFISFVYQ HYLDEKKLKT SHTSPVGDPH LLPAEEGHTN IHSV
Arabidopsis Description
PUP8Probable purine permease 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.