Factsheet for PGSC0003DMT400025125

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400015077
PGSC0003DMT400050482
PGSC0003DMT400080283

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18205.1	PGSC0003DMT400015077	AT5G22290.1	21798944
AT4G18205.1	PGSC0003DMT400050482	AT5G22290.1	21798944
AT4G18220.1	PGSC0003DMT400080283	AT2G13650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g071050.2.1	Tomato	plasma membrane	92.6	93.8
PGSC0003DMT400025123	Potato	plasma membrane	52.3	52.3
CDY08900	Canola	plasma membrane	35.46	44.69
VIT_10s0003g02850.t01	Wine grape	plasma membrane	41.07	43.51
AT4G18220.1	Thale cress	plasma membrane	42.6	42.82
CDX76537	Canola	plasma membrane	42.09	42.31
CDX78835	Canola	plasma membrane	42.09	42.2
Bra013292.1-P	Field mustard	plasma membrane	41.84	42.05
KRH45390	Soybean	plasma membrane	34.18	41.88
CDX99493	Canola	plasma membrane	41.84	41.84
CDY08899	Canola	cytosol, peroxisome, plasma membrane	41.33	41.54
CDX90414	Canola	plasma membrane	39.54	41.33
Bra021018.1-P	Field mustard	plasma membrane	41.84	41.21
CDY08897	Canola	plasma membrane	41.07	41.18
PGSC0003DMT400004654	Potato	endoplasmic reticulum, plasma membrane, plastid	31.63	41.06
AT4G18210.1	Thale cress	plasma membrane	40.56	40.77
CDY01525	Canola	plasma membrane	39.29	40.74
CDX76536	Canola	plasma membrane	30.36	40.61
AT4G18205.1	Thale cress	plasma membrane	39.03	40.58
PGSC0003DMT400025116	Potato	plasma membrane	39.8	40.41
Bra040924.1-P	Field mustard	plasma membrane	40.31	40.41
PGSC0003DMT400004651	Potato	cytosol, nucleus, plasma membrane	33.93	40.06
CDX76538	Canola	plasma membrane	39.8	39.8
Bra013291.1-P	Field mustard	plasma membrane	37.5	39.73
AT4G18197.1	Thale cress	plasma membrane	39.03	39.23
AT4G18195.1	Thale cress	plasma membrane	39.29	39.09
PGSC0003DMT400035009	Potato	endoplasmic reticulum, extracellular	15.05	39.07
KRG98518	Soybean	plasma membrane	40.82	38.65
KRH46353	Soybean	plasma membrane	40.82	38.55
Bra040925.1-P	Field mustard	plasma membrane	38.01	38.21
PGSC0003DMT400004320	Potato	plasma membrane	35.71	37.94
CDY08895	Canola	plasma membrane	38.01	37.72
CDX76540	Canola	plasma membrane	38.01	37.53
PGSC0003DMT400035010	Potato	endoplasmic reticulum, peroxisome, plasma membrane	34.69	35.88
VIT_10s0003g02840.t01	Wine grape	plasma membrane	39.54	35.15
PGSC0003DMT400025122	Potato	plasma membrane	33.16	34.48
PGSC0003DMT400025118	Potato	plasma membrane	32.4	32.32
PGSC0003DMT400072048	Potato	extracellular, plasma membrane	20.15	29.04
PGSC0003DMT400036604	Potato	extracellular, plasma membrane	25.26	28.86
PGSC0003DMT400054207	Potato	plasma membrane	12.76	28.25
PGSC0003DMT400028938	Potato	cytosol, endoplasmic reticulum, plasma membrane	24.49	26.97
PGSC0003DMT400071864	Potato	plasma membrane	22.7	26.1
PGSC0003DMT400086024	Potato	cytosol, endoplasmic reticulum, extracellular	9.18	25.53
PGSC0003DMT400005470	Potato	extracellular, plasma membrane	22.19	24.58
PGSC0003DMT400090756	Potato	endoplasmic reticulum, extracellular, vacuole	8.93	24.31
PGSC0003DMT400039797	Potato	mitochondrion	10.71	24.0
PGSC0003DMT400005467	Potato	plasma membrane	21.17	23.58
PGSC0003DMT400090938	Potato	endoplasmic reticulum, extracellular	9.44	23.27
PGSC0003DMT400085139	Potato	mitochondrion	22.45	22.74
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	9.69	22.35
PGSC0003DMT400035529	Potato	cytosol, mitochondrion, peroxisome, plastid	23.21	21.46
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	17.35	21.38

Protein Annotations

EnsemblPlants:PGSC0003DMT400025125	EnsemblPlantsGene:PGSC0003DMG400009708	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF17
PFAM:PF16913	PGSC:PGSC0003DMG400009708	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00029686C4
UniProt:M1AL15	MapMan:24.2.1.6	:	:	:	:

Description

Purine permease 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400009708]

Coordinates

chr2:-:30209943..30212109

Molecular Weight (calculated)

43583.0 Da

IEP (calculated)

8.251

GRAVY (calculated)

0.527

Length

392 amino acids

Sequence
(BLAST)

001: MGTVAEKELD IINVQEETDP KTKKMDALIV IPAETPNSVN KYTKWLEIGI YALIVLVSQS VATILGKLYY NKGGKSTWLI SLTETIAFPI LLIPMIFNCT
101: NNNNNKIPKL EYHDSKSPSL MTKLFIYVFL GFLVGVGCGL FSIGLLHLPA STFSLISSSQ LAFNVLFSLF MKLEKITPLI ANSIALVTIS SLLLALDSSN
201: KASSSSLSNH HNAIGFICTL IASALFGLLF SLTDLLFRKF LKKNTLREFM DVIICQSFFA TCIILIGLFA SKNWRNLKTE MNNFELGRLA YVMILIWISV
301: CWQLYTYCLL GLIMKVSAVF ANVITTLSAP LIPIMSVIIF NDKMSGVKAI SIVLAIWGFS SYAYQQYLDE LNLKGDRNGI EDESTDQQTT TI

Best Arabidopsis Sequence Match ( AT4G18220.1 )
(BLAST)

001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK

Arabidopsis Description

PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.