Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400015077 | |
| PGSC0003DMT400050482 | |
| PGSC0003DMT400080283 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18205.1 | PGSC0003DMT400015077 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | PGSC0003DMT400050482 | AT5G22290.1 | 21798944 |
| AT4G18220.1 | PGSC0003DMT400080283 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005820.2.1 | Tomato | plasma membrane | 90.24 | 81.43 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 42.48 | 43.51 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 16.36 | 41.06 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 39.84 | 39.12 |
| KRH45390 | Soybean | plasma membrane | 31.93 | 37.81 |
| PGSC0003DMT400004654 | Potato | endoplasmic reticulum, plasma membrane, plastid | 30.08 | 37.75 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 36.94 | 37.14 |
| CDY08900 | Canola | plasma membrane | 30.08 | 36.66 |
| AT4G18220.1 | Thale cress | plasma membrane | 37.2 | 36.15 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 36.94 | 35.9 |
| CDX78835 | Canola | plasma membrane | 36.94 | 35.81 |
| CDY01525 | Canola | plasma membrane | 35.62 | 35.71 |
| CDX99493 | Canola | plasma membrane | 36.94 | 35.71 |
| CDX76537 | Canola | plasma membrane | 36.68 | 35.64 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 34.56 | 35.5 |
| Bra013292.1-P | Field mustard | plasma membrane | 36.41 | 35.38 |
| CDY08895 | Canola | plasma membrane | 36.68 | 35.19 |
| Bra013291.1-P | Field mustard | plasma membrane | 34.3 | 35.14 |
| Bra040925.1-P | Field mustard | plasma membrane | 36.15 | 35.13 |
| CDY08897 | Canola | plasma membrane | 36.15 | 35.04 |
| AT4G18195.1 | Thale cress | plasma membrane | 36.41 | 35.03 |
| CDX76540 | Canola | plasma membrane | 36.68 | 35.01 |
| KRH46353 | Soybean | plasma membrane | 38.26 | 34.94 |
| PGSC0003DMT400004651 | Potato | cytosol, nucleus, plasma membrane | 30.61 | 34.94 |
| Bra021018.1-P | Field mustard | plasma membrane | 36.68 | 34.92 |
| AT4G18210.1 | Thale cress | plasma membrane | 35.88 | 34.87 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 36.15 | 34.86 |
| KRG98518 | Soybean | plasma membrane | 37.99 | 34.78 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 35.88 | 34.69 |
| CDX90414 | Canola | plasma membrane | 34.3 | 34.67 |
| AT4G18205.1 | Thale cress | plasma membrane | 34.3 | 34.48 |
| CDX76536 | Canola | plasma membrane | 26.65 | 34.47 |
| Bra040924.1-P | Field mustard | plasma membrane | 35.36 | 34.27 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 35.36 | 34.18 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 39.58 | 34.01 |
| CDX76538 | Canola | plasma membrane | 35.09 | 33.93 |
| AT4G18197.1 | Thale cress | plasma membrane | 33.77 | 32.82 |
| PGSC0003DMT400054207 | Potato | plasma membrane | 12.93 | 27.68 |
| PGSC0003DMT400086024 | Potato | cytosol, endoplasmic reticulum, extracellular | 10.03 | 26.95 |
| PGSC0003DMT400005470 | Potato | extracellular, plasma membrane | 25.07 | 26.84 |
| PGSC0003DMT400036604 | Potato | extracellular, plasma membrane | 24.27 | 26.82 |
| PGSC0003DMT400045771 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 11.87 | 26.47 |
| PGSC0003DMT400071864 | Potato | plasma membrane | 22.96 | 25.51 |
| PGSC0003DMT400028938 | Potato | cytosol, endoplasmic reticulum, plasma membrane | 23.75 | 25.28 |
| PGSC0003DMT400072048 | Potato | extracellular, plasma membrane | 17.94 | 25.0 |
| PGSC0003DMT400039797 | Potato | mitochondrion | 11.35 | 24.57 |
| PGSC0003DMT400045772 | Potato | cytosol, peroxisome, vacuole | 20.58 | 24.53 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 9.23 | 24.31 |
| PGSC0003DMT400005467 | Potato | plasma membrane | 22.43 | 24.15 |
| PGSC0003DMT400085139 | Potato | mitochondrion | 24.27 | 23.77 |
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 9.76 | 23.27 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 25.59 | 22.88 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400035010 | EnsemblPlantsGene:PGSC0003DMG401013464 | EntrezGene:102579559 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | ncoils:Coil |
| PANTHER:PTHR31376 | PANTHER:PTHR31376:SF17 | PFAM:PF16913 | PGSC:PGSC0003DMG401013464 | RefSeq:XP_006356083.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000295668B | UniProt:M1B1N9 | MapMan:24.2.1.6 | : | : |
Description
Purine transporter [Source:PGSC_GENE;Acc:PGSC0003DMG401013464]
Coordinates
chr3:-:788943..793855
Molecular Weight (calculated)
42476.3 Da
IEP (calculated)
7.231
GRAVY (calculated)
0.545
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVQQKLLD IPNEEICEDE NSNIESSGST HSCSYFAKHK WWYQVAIFTL FTLIGEVVTT LLVKTYFTKG GKSIWLVSLV QNAGFPILLP FLYYVSLKNN
101: SQIEVIEGNQ EPHICIIFLV YVVLGVLLGG VSVFNSVGLK YLQVSTYSLT STTRLGFTII FSLFHSAHKF TPAIVNSIVL VIAASVILVV HNNESGEMSS
201: GKFLLGFFST IGGSVTYSLV LSLTEFSYRK IIKGRKFIDI IEMSIYQTLV ASIVILLGFF ISGDWKNLIM EMEKYQLGKL SYVVILFFIA ISCQLKVVAS
301: IGLVFKVNPL MSNVFNNLGA PITPIFSVIF LHDKIKGLKL VIMFLAFWGF GSQIYQQYLN HMEAKEELIE QNSKEVSSS
101: SQIEVIEGNQ EPHICIIFLV YVVLGVLLGG VSVFNSVGLK YLQVSTYSLT STTRLGFTII FSLFHSAHKF TPAIVNSIVL VIAASVILVV HNNESGEMSS
201: GKFLLGFFST IGGSVTYSLV LSLTEFSYRK IIKGRKFIDI IEMSIYQTLV ASIVILLGFF ISGDWKNLIM EMEKYQLGKL SYVVILFFIA ISCQLKVVAS
301: IGLVFKVNPL MSNVFNNLGA PITPIFSVIF LHDKIKGLKL VIMFLAFWGF GSQIYQQYLN HMEAKEELIE QNSKEVSSS
001: MMELESETQE LHLHVNGEPE GKFSTEERSH KYSWRLRVSL YVTLLLAGET IATLLGRLYY EKGGKSTWLE TLVQLVGFPL TLPCYYYLKP EPSKTKTITK
101: KTTSSFLTLS LVYIGLGLLV AGHCILYSFG LLYLPVSTFS LISASQLAFN AVFSYFLNSQ KITPFILNSL VLLTISSTLL VIQHEPESPS STSKSAAKSK
201: YVIGYICAVG SSAGYSLVLS LTDYAFEKIL KKYTFKAILD MATYPSMVAT CVVVVGLFGS GGWKKLSTEM EEFQLGKSSY ILINIGSTIS WQACLIGSVG
301: LIIEVSSLFS NVISTLCLPV VPVLAVVFFR DEMSGIKLVA MFLAIWGFVS YGYQHYVNDR KPEEDQELPQ SKEEEEQKQV DTIHVQA
101: KTTSSFLTLS LVYIGLGLLV AGHCILYSFG LLYLPVSTFS LISASQLAFN AVFSYFLNSQ KITPFILNSL VLLTISSTLL VIQHEPESPS STSKSAAKSK
201: YVIGYICAVG SSAGYSLVLS LTDYAFEKIL KKYTFKAILD MATYPSMVAT CVVVVGLFGS GGWKKLSTEM EEFQLGKSSY ILINIGSTIS WQACLIGSVG
301: LIIEVSSLFS NVISTLCLPV VPVLAVVFFR DEMSGIKLVA MFLAIWGFVS YGYQHYVNDR KPEEDQELPQ SKEEEEQKQV DTIHVQA
Arabidopsis Description
PUP6Probable purine permease 6 [Source:UniProtKB/Swiss-Prot;Acc:O49722]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.