Factsheet for VIT_10s0003g02850.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_04s0044g01330.t01
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18205.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944
AT4G18220.1	VIT_04s0044g01330.t01	AT2G13650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g02840.t01	Wine grape	plasma membrane	72.7	61.0
KRH45390	Soybean	plasma membrane	49.46	57.19
VIT_02s0012g00730.t01	Wine grape	plasma membrane	60.0	57.07
KRG98518	Soybean	plasma membrane	61.62	55.07
KRH46353	Soybean	plasma membrane	61.08	54.46
CDY08900	Canola	plasma membrane	45.68	54.34
AT4G18210.1	Thale cress	plasma membrane	56.49	53.59
AT4G18220.1	Thale cress	plasma membrane	56.49	53.59
Bra013292.1-P	Field mustard	plasma membrane	56.49	53.59
CDX99493	Canola	plasma membrane	56.76	53.57
Bra021018.1-P	Field mustard	plasma membrane	57.57	53.52
CDY08897	Canola	plasma membrane	56.49	53.45
Bra040924.1-P	Field mustard	plasma membrane	56.22	53.2
CDX78835	Canola	plasma membrane	56.22	53.2
CDY08899	Canola	cytosol, peroxisome, plasma membrane	55.95	53.08
CDX76537	Canola	plasma membrane	55.95	53.08
Solyc02g071110.2.1	Tomato	plasma membrane	53.78	52.51
CDX76538	Canola	plasma membrane	55.14	52.04
CDX76536	Canola	plasma membrane	41.08	51.88
PGSC0003DMT400025116	Potato	plasma membrane	52.97	50.78
VIT_19s0014g00150.t01	Wine grape	plasma membrane	50.54	49.34
CDX90414	Canola	plasma membrane	48.92	48.27
CDY01525	Canola	plasma membrane	49.19	48.15
AT4G18205.1	Thale cress	plasma membrane	48.92	48.01
Bra013291.1-P	Field mustard	plasma membrane	47.84	47.84
Bra040925.1-P	Field mustard	plasma membrane	50.0	47.44
CDX76540	Canola	plasma membrane	50.27	46.85
CDY08895	Canola	plasma membrane	50.0	46.84
AT4G18195.1	Thale cress	plasma membrane	49.19	46.19
PGSC0003DMT400035009	Potato	endoplasmic reticulum, extracellular	18.65	45.7
VIT_15s0021g00650.t01	Wine grape	plastid	46.22	45.0
AT4G18197.1	Thale cress	plasma membrane	47.3	44.87
Solyc02g071080.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid, vacuole	29.73	44.18
Solyc02g071060.2.1	Tomato	plasma membrane	47.03	44.05
Solyc03g005810.2.1	Tomato	endoplasmic reticulum, extracellular, plastid	28.92	43.67
PGSC0003DMT400025123	Potato	plasma membrane	46.22	43.62
Solyc02g071100.2.1	Tomato	nucleus	43.78	43.2
PGSC0003DMT400035010	Potato	endoplasmic reticulum, peroxisome, plasma membrane	43.51	42.48
Solyc02g071050.2.1	Tomato	plasma membrane	43.51	41.6
PGSC0003DMT400025125	Potato	plasma membrane	43.51	41.07
Solyc02g071090.2.1	Tomato	plasma membrane	41.35	40.8
PGSC0003DMT400025122	Potato	plasma membrane	41.08	40.32
PGSC0003DMT400025118	Potato	plasma membrane	42.16	39.69
Solyc03g005820.2.1	Tomato	plasma membrane	42.16	37.14
VIT_18s0001g06940.t01	Wine grape	endoplasmic reticulum, plasma membrane	29.46	31.05
VIT_18s0089g01410.t01	Wine grape	plasma membrane	28.11	30.23
VIT_18s0001g06910.t01	Wine grape	plasma membrane	28.38	29.91
VIT_18s0001g06950.t01	Wine grape	plasma membrane	28.11	29.8
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.78	27.85
VIT_11s0016g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	25.95	27.12

Protein Annotations

EntrezGene:100241841	wikigene:100241841	MapMan:24.2.1.6	EMBL:AM434342	ProteinID:CAN64869	ProteinID:CAN64869.1
ProteinID:CCB55763	ProteinID:CCB55763.1	UniProt:F6HMH4	EMBL:FN595992	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100241841
wikigene:LOC100241841	PFAM:PF16913	PANTHER:PTHR31376	PANTHER:PTHR31376:SF17	InterPro:PUP_plant	TMHMM:TMhelix
UniParc:UPI000198592D	ArrayExpress:VIT_10s0003g02850	EnsemblPlantsGene:VIT_10s0003g02850	EnsemblPlants:VIT_10s0003g02850.t01	RefSeq:XP_002272204	RefSeq:XP_002272204.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:4934999..4937597

Molecular Weight (calculated)

40830.4 Da

IEP (calculated)

7.771

GRAVY (calculated)

0.592

Length

370 amino acids

Sequence
(BLAST)

001: MGEARELQLQ IMGQEAREEN SAEGNVVLQT MTPRIRKYMW WLQIAIYSLF VLSGQTVATL LGRLYFEKGG KSKWLATLVQ LAGFPILLPL YCLSLPKSPR
101: TSDSHTSQPS ALVLLLLYVS LGILLAGDCM MYSVGLSYLP VSTYSLICAT QLAFNAFFSF FLNSQKFTPF IVNSLVLLTT SSTLLVFQTG DSSDPKRVAK
201: GKYIIGFLCT LCASAGSGLA LSLIQLSFQK ILKRETYTVI LDLIIYQSLV ATCVAMVGLF ASGDWKSLNR EMGDFELGKV SYLMILLWTA VGWAVFSVGL
301: FGLIFEVSSL FSNVISTLGL PIVPVLAVVF FHDKMDGVKV IAMLLGIWGF VSYIYQHYLD DSKAENTNVD

Best Arabidopsis Sequence Match ( AT4G18210.1 )
(BLAST)

001: MTADQELQII VRQGKEPNPT VQDERNSVSS SQAEVSHSNT YKRWLRVTLY TFFVISGQTV ATILGRVYYD NGGNSKWLAT VVQLVGFPVL LPYYILSFKT
101: HATTDRDGKR TSPRNRVLVY VVLGLLVGAD CYLYSIGLLY LPVSTYSLIC ASQLAFNAFF SYFLNSQKLT PIILNSLFLL TISSTLLAFN NEETDSTKVT
201: KGEYVKGFIC TVAASAGYGL VLSLQQLAFL KVLKKQNFSE VMDMIIYVSL VASCVSVVGL FASSEWKTLS SEMDNYKHGK VSYIMNLVWT AVTWQVFSIG
301: GTGLIFELSS LFSNAISVLG LPVVPILAVI IFHDKMNGLK VISMILAIWG FTSYVYQQYL DDKNLKKNHE ITTTESPDPP EAEESTWQSK

Arabidopsis Description

PUP10Probable purine permease 10 [Source:UniProtKB/Swiss-Prot;Acc:O49725]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.