Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- plasma membrane 5
- plastid 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g074170.2.1 | |
| Solyc11g065020.1.1 | |
| Solyc11g068750.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18205.1 | Solyc06g074170.2.1 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | Solyc11g068750.1.1 | AT5G22290.1 | 21798944 |
| AT4G18220.1 | Solyc11g065020.1.1 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025123 | Potato | plasma membrane | 93.42 | 94.13 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 50.63 | 51.68 |
| KRH45390 | Soybean | plasma membrane | 38.99 | 48.12 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 44.05 | 47.03 |
| CDY08900 | Canola | plasma membrane | 35.95 | 45.66 |
| AT4G18205.1 | Thale cress | plasma membrane | 43.29 | 45.36 |
| CDX90414 | Canola | plasma membrane | 43.04 | 45.33 |
| KRG98518 | Soybean | plasma membrane | 47.09 | 44.93 |
| CDY01525 | Canola | plasma membrane | 42.53 | 44.44 |
| KRH46353 | Soybean | plasma membrane | 46.58 | 44.34 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 42.53 | 44.33 |
| Bra013291.1-P | Field mustard | plasma membrane | 41.52 | 44.32 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 27.85 | 44.18 |
| AT4G18220.1 | Thale cress | plasma membrane | 43.54 | 44.1 |
| Bra040925.1-P | Field mustard | plasma membrane | 43.29 | 43.85 |
| CDX76537 | Canola | plasma membrane | 43.29 | 43.85 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 43.29 | 43.85 |
| AT4G18195.1 | Thale cress | plasma membrane | 43.54 | 43.65 |
| AT4G18197.1 | Thale cress | plasma membrane | 43.04 | 43.59 |
| CDY08897 | Canola | plasma membrane | 43.04 | 43.48 |
| Bra040924.1-P | Field mustard | plasma membrane | 43.04 | 43.48 |
| Bra013292.1-P | Field mustard | plasma membrane | 42.78 | 43.33 |
| CDY08895 | Canola | plasma membrane | 43.29 | 43.29 |
| Bra021018.1-P | Field mustard | plasma membrane | 43.54 | 43.22 |
| CDX99493 | Canola | plasma membrane | 42.78 | 43.11 |
| AT4G18210.1 | Thale cress | plasma membrane | 42.53 | 43.08 |
| CDX76540 | Canola | plasma membrane | 43.29 | 43.07 |
| CDX78835 | Canola | plasma membrane | 42.28 | 42.71 |
| CDX76538 | Canola | plasma membrane | 42.03 | 42.35 |
| Solyc08g077370.2.1 | Tomato | plasma membrane | 35.19 | 41.62 |
| Solyc08g077380.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 39.24 | 41.11 |
| CDX76536 | Canola | plasma membrane | 30.38 | 40.96 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 45.06 | 40.36 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 37.47 | 39.47 |
| Solyc02g071100.2.1 | Tomato | nucleus | 37.22 | 39.2 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 35.44 | 38.46 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 22.53 | 36.33 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 32.15 | 30.24 |
| Solyc12g087870.1.1 | Tomato | plasma membrane | 26.08 | 28.93 |
| Solyc04g074870.2.1 | Tomato | extracellular, plasma membrane | 25.06 | 27.97 |
| Solyc07g008440.2.1 | Tomato | plasma membrane | 25.32 | 27.25 |
| Solyc12g057100.1.1 | Tomato | cytosol, golgi, plasma membrane | 24.81 | 27.07 |
| Solyc04g074880.2.1 | Tomato | plasma membrane | 24.05 | 26.76 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 24.05 | 26.61 |
| Solyc06g035420.1.1 | Tomato | extracellular, plasma membrane | 21.77 | 26.14 |
| Solyc12g057090.1.1 | Tomato | plasma membrane | 19.49 | 25.93 |
| Solyc07g005660.2.1 | Tomato | plasma membrane | 20.76 | 25.0 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 24.81 | 24.62 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 23.8 | 24.61 |
| Solyc12g087880.1.1 | Tomato | extracellular, plasma membrane, vacuole | 10.38 | 24.12 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 23.04 | 22.14 |
Protein Annotations
| EnsemblPlants:Solyc02g071060.2.1 | EnsemblPlantsGene:Solyc02g071060.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF17 |
| PFAM:PF16913 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002768A38 | UniProt:K4B882 |
| MapMan:24.2.1.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:40549442..40550843
Molecular Weight (calculated)
44397.6 Da
IEP (calculated)
8.539
GRAVY (calculated)
0.376
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEPQVENQL NISLHIVEEE VNMANNSTNS WREKYNRWIE ISFNAALVLV CLSAATLLGE LYYREGGKST WMNSLVQMVG FPILFPILFL KKREENKDED
101: DLIKNTINSN NKKPSVWMFL SVYVFLGFLL GGSCMLNAVG LLHLPVSTFS LISASQLGFN ALFSFFLNSQ KITTYIANSI ILLTVSSILL VFQPDDSSST
201: GSSKGKGYVL IGFICTLFGS AGYALLLSAT ERIFRNIMKK RTLKEVMNVV IWQSFFATCT ILIGLFASGE WRWMKREMNE YKLGKVSYVM TLVWNALAWQ
301: IYTIGLLSLI MKVSALFANV ITALSVPLIP VLALIFFNEK MSGVKVISMI LAIWGFLSYG YQQYLDEVNL KIELSKAKEE AEVSLVETGL NHRAN
101: DLIKNTINSN NKKPSVWMFL SVYVFLGFLL GGSCMLNAVG LLHLPVSTFS LISASQLGFN ALFSFFLNSQ KITTYIANSI ILLTVSSILL VFQPDDSSST
201: GSSKGKGYVL IGFICTLFGS AGYALLLSAT ERIFRNIMKK RTLKEVMNVV IWQSFFATCT ILIGLFASGE WRWMKREMNE YKLGKVSYVM TLVWNALAWQ
301: IYTIGLLSLI MKVSALFANV ITALSVPLIP VLALIFFNEK MSGVKVISMI LAIWGFLSYG YQQYLDEVNL KIELSKAKEE AEVSLVETGL NHRAN
001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
Arabidopsis Description
PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.