Factsheet for Solyc02g071110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g074170.2.1
Solyc11g065020.1.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18205.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT4G18205.1	Solyc11g068750.1.1	AT5G22290.1	21798944
AT4G18220.1	Solyc11g065020.1.1	AT2G13650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025116	Potato	plasma membrane	93.4	91.71
VIT_10s0003g02850.t01	Wine grape	plasma membrane	52.51	53.78
KRH45390	Soybean	plasma membrane	43.01	50.94
VIT_10s0003g02840.t01	Wine grape	plasma membrane	55.41	47.62
Solyc02g071080.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid, vacuole	30.87	46.99
KRG98518	Soybean	plasma membrane	50.92	46.62
KRH46353	Soybean	plasma membrane	50.92	46.51
CDX76537	Canola	plasma membrane	47.49	46.15
Bra013292.1-P	Field mustard	plasma membrane	47.49	46.15
Solyc03g005810.2.1	Tomato	endoplasmic reticulum, extracellular, plastid	29.82	46.12
CDX78835	Canola	plasma membrane	47.49	46.04
CDX99493	Canola	plasma membrane	47.49	45.92
CDY08897	Canola	plasma membrane	46.97	45.52
CDY08899	Canola	cytosol, peroxisome, plasma membrane	46.7	45.38
CDY08900	Canola	plasma membrane	37.2	45.34
CDX90414	Canola	plasma membrane	44.85	45.33
Solyc01g088550.2.1	Tomato	plasma membrane	43.54	45.33
AT4G18220.1	Thale cress	plasma membrane	46.44	45.13
Bra040924.1-P	Field mustard	plasma membrane	46.44	45.01
Bra021018.1-P	Field mustard	plasma membrane	46.97	44.72
AT4G18205.1	Thale cress	plasma membrane	44.33	44.56
CDX76538	Canola	plasma membrane	45.91	44.39
AT4G18210.1	Thale cress	plasma membrane	45.65	44.36
CDY01525	Canola	plasma membrane	44.06	44.18
AT4G18195.1	Thale cress	plasma membrane	45.91	44.16
Bra040925.1-P	Field mustard	plasma membrane	45.38	44.1
Bra013291.1-P	Field mustard	plasma membrane	43.01	44.05
CDY08895	Canola	plasma membrane	45.65	43.8
CDX76540	Canola	plasma membrane	45.65	43.58
Solyc02g071090.2.1	Tomato	plasma membrane	43.01	43.47
Solyc08g077370.2.1	Tomato	plasma membrane	37.99	43.11
Solyc08g077380.2.1	Tomato	peroxisome, plasma membrane, vacuole	42.74	42.97
Solyc02g071100.2.1	Tomato	nucleus	42.48	42.93
Solyc02g071060.2.1	Tomato	plasma membrane	44.33	42.53
AT4G18197.1	Thale cress	plasma membrane	43.01	41.79
CDX76536	Canola	plasma membrane	31.93	41.3
Solyc02g071050.2.1	Tomato	plasma membrane	39.84	39.02
Solyc03g005820.2.1	Tomato	plasma membrane	39.58	35.71
Solyc07g008440.2.1	Tomato	plasma membrane	29.02	29.97
Solyc12g057090.1.1	Tomato	plasma membrane	23.22	29.63
Solyc12g087870.1.1	Tomato	plasma membrane	27.7	29.49
Solyc06g035420.1.1	Tomato	extracellular, plasma membrane	25.33	29.18
Solyc04g074870.2.1	Tomato	extracellular, plasma membrane	26.91	28.81
Solyc10g005160.1.1	Tomato	plasma membrane	26.12	27.73
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	26.39	27.62
Solyc04g074880.2.1	Tomato	plasma membrane	25.86	27.61
Solyc12g087880.1.1	Tomato	extracellular, plasma membrane, vacuole	12.14	27.06
Solyc10g005150.1.1	Tomato	plasma membrane	25.86	25.65
Solyc07g005660.2.1	Tomato	plasma membrane	21.64	25.0
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	26.12	24.87
Solyc02g082170.1.1	Tomato	plasma membrane	25.33	23.36

Protein Annotations

EnsemblPlants:Solyc02g071110.2.1	EnsemblPlantsGene:Solyc02g071110.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF17
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002768BF7	UniProt:K4B887
MapMan:24.2.1.6	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:40591525..40595205

Molecular Weight (calculated)

42661.9 Da

IEP (calculated)

9.443

GRAVY (calculated)

0.370

Length

379 amino acids

Sequence
(BLAST)

001: MGDSPAIELT LVQGEEVKRE EIIPQNESQL KGPTLVHYKW WIQMIIYSIL VLSTQAIGTL LGRIYFEKGG NSKWLATLVQ TIAFPILIPF LFIKPKKTNK
101: NIEIIKKPSF IIVTSLYTIL GLFIAGNCML YTIGLQYLPV TTYSLICASQ LGFNAIFSYF LNKQKFTPYI VNSLVILTIS STLLVLHNDD PSEPTNNNET
201: SRQKYIFGFL STLAASAGYA LMLSTTQLAL QKIFKRESFR LIIEMSTYQS ISATMVLLIG LFASGEWKKL VKEMNEYELG KISYVLNLVG TSICWQFYTV
301: GSVGLIFKVS SLFSNVISIL GLPVAPALAV MFLHDKLSGI KVMSMVLAIW GFVSYMYQHY LDDLKEKAEK KRGKISEDF

Best Arabidopsis Sequence Match ( AT4G18220.1 )
(BLAST)

001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK

Arabidopsis Description

PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.