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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • golgi 3
  • plasma membrane 6
  • endoplasmic reticulum 4
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 40.73 85.29
Solyc07g008440.2.1 Tomato plasma membrane 62.92 61.04
VIT_18s0001g06950.t01 Wine grape plasma membrane 58.99 60.17
VIT_18s0001g06910.t01 Wine grape plasma membrane 58.15 58.97
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 54.21 58.66
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 57.02 57.83
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 55.9 55.74
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 54.21 54.52
CDY35722 Canola plasma membrane 54.21 54.52
KRH52994 Soybean cytosol, nucleus, plasma membrane 52.81 54.49
Bra010890.1-P Field mustard plasma membrane 53.09 53.69
CDX90136 Canola plasma membrane 53.09 53.69
Solyc04g074880.2.1 Tomato plasma membrane 53.37 53.52
AT1G28230.1 Thale cress plasma membrane 53.37 53.37
KRH72416 Soybean endoplasmic reticulum, plasma membrane 51.4 53.2
CDY27947 Canola plasma membrane 50.56 51.58
CDY17197 Canola extracellular, plasma membrane 50.84 51.57
AT2G33750.1 Thale cress plasma membrane 51.4 51.12
CDX94595 Canola plasma membrane 50.0 51.0
Bra030078.1-P Field mustard extracellular, plasma membrane 49.72 50.72
CDX94594 Canola extracellular, plasma membrane 49.72 50.72
Bra005474.1-P Field mustard extracellular, plasma membrane 50.0 50.71
Bra010891.1-P Field mustard plasma membrane 50.56 50.56
AT1G28220.1 Thale cress plasma membrane 49.72 50.43
CDX90135 Canola plasma membrane 45.51 50.15
Bra036866.1-P Field mustard plasma membrane 52.81 50.0
CDY46618 Canola plasma membrane 31.74 49.78
CDY29741 Canola plasma membrane 52.53 49.6
CDY35721 Canola plasma membrane 44.38 49.53
CDY12422 Canola plasma membrane 51.97 49.2
CDY16284 Canola plasma membrane 51.97 49.07
CDY15687 Canola plasma membrane 41.01 48.18
HORVU5Hr1G069880.1 Barley plasma membrane 35.39 46.67
CDY72169 Canola plasma membrane 32.58 45.85
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 43.26 45.7
TraesCS2B01G617100.1 Wheat plasma membrane 46.07 45.18
TraesCS5B01G244800.1 Wheat plasma membrane 47.19 44.56
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 14.89 44.54
TraesCS5A01G429100.1 Wheat plasma membrane 47.75 44.16
TraesCS5D01G254100.1 Wheat plasma membrane 46.63 44.03
TraesCS5A01G247600.1 Wheat plasma membrane 46.63 44.03
TraesCS5B01G431200.2 Wheat plasma membrane 47.19 43.64
TraesCS5D01G437200.1 Wheat plasma membrane 47.19 43.52
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 47.47 43.33
KXG35809 Sorghum plasma membrane 45.51 41.65
Solyc12g057090.1.1 Tomato plasma membrane 34.55 41.41
TraesCS5B01G245000.1 Wheat plasma membrane 32.3 41.37
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 46.63 39.81
Solyc12g057100.1.1 Tomato cytosol, golgi, plasma membrane 40.17 39.5
TraesCS5B01G244900.1 Wheat plasma membrane 41.57 39.05
TraesCS5A01G247700.1 Wheat plasma membrane 41.01 38.62
TraesCS5D01G254200.2 Wheat plasma membrane 42.98 37.32
Solyc10g005160.1.1 Tomato plasma membrane 35.39 35.29
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 34.27 35.06
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 42.42 35.03
Solyc10g005150.1.1 Tomato plasma membrane 36.8 34.29
Solyc10g005170.1.1 Tomato cytosol, peroxisome, plasma membrane 35.96 32.16
Solyc01g088550.2.1 Tomato plasma membrane 31.46 30.77
Solyc02g071080.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid, vacuole 20.51 29.32
Solyc02g082170.1.1 Tomato plasma membrane 33.43 28.95
Solyc08g077370.2.1 Tomato plasma membrane 26.4 28.14
Solyc08g077380.2.1 Tomato peroxisome, plasma membrane, vacuole 29.78 28.12
Solyc07g005660.2.1 Tomato plasma membrane 25.56 27.74
Solyc02g071110.2.1 Tomato plasma membrane 29.49 27.7
Solyc02g071060.2.1 Tomato plasma membrane 28.93 26.08
HORVU7Hr1G086680.1 Barley mitochondrion 13.48 25.0
Solyc02g071100.2.1 Tomato nucleus 25.84 24.53
Solyc02g071090.2.1 Tomato plasma membrane 24.44 23.2
Solyc02g071050.2.1 Tomato plasma membrane 24.72 22.74
Solyc03g005810.2.1 Tomato endoplasmic reticulum, extracellular, plastid 15.17 22.04
Solyc03g005820.2.1 Tomato plasma membrane 24.44 20.71
Protein Annotations
EnsemblPlants:Solyc12g087870.1.1EnsemblPlantsGene:Solyc12g087870.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF1
PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000276A83EUniProt:K4DGK8
MapMan:24.2.1.6:::::
Description
No Description!
Coordinates
chr12:+:63371457..63373124
Molecular Weight (calculated)
39786.6 Da
IEP (calculated)
8.864
GRAVY (calculated)
0.658
Length
356 amino acids
Sequence
(BLAST)
001: MEEEANFLSI NMKRFLLIIN CLLLSVGVCG GPLMMRLYFV EGGLRIWFNS WLQTGGWPLT IIPLVILYFY RRKIEGSDTK LYYTTPRIFI ASFVIGIFTG
101: FDAYLYSWGG SKLPVSTSSL LIAAQLAFTA IGAYFIVKIK FTSYSINAVV LLTLGAVLLG IRSNGDRPEG VTSKEYVIGF IMTLLAAALY GLILPCIELM
201: YLKAKQAITA TLVLEIQMVM CFASTAFCTI GMIANKDFQA ISRETKKFNL GEARYYIVVI WSAIIWQCFF VGAVGVIYLS SSLMSGVLIA VLLPITEILG
301: VIFFDEKFSS EKGLSLFLSL WGFVSYFYGE FKQAKKVEKK KIQENEMTTT TQIEPA
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.