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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90135 Canola plasma membrane 76.65 53.87
CDY35721 Canola plasma membrane 75.33 53.6
CDX90136 Canola plasma membrane 74.89 48.3
CDY35722 Canola plasma membrane 74.89 48.02
AT1G28230.1 Thale cress plasma membrane 74.45 47.47
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 24.67 47.06
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 34.8 46.47
PGSC0003DMT400039797 Potato mitochondrion 31.72 41.14
CDY72169 Canola plasma membrane 45.81 41.11
CDY27947 Canola plasma membrane 62.56 40.69
CDY17197 Canola extracellular, plasma membrane 62.11 40.17
CDY15687 Canola plasma membrane 52.86 39.6
PGSC0003DMT400072048 Potato extracellular, plasma membrane 45.81 38.24
CDY12422 Canola plasma membrane 63.0 38.03
CDY29741 Canola plasma membrane 63.0 37.93
HORVU5Hr1G069880.1 Barley plasma membrane 44.93 37.78
CDY16284 Canola plasma membrane 62.56 37.67
KRH72416 Soybean endoplasmic reticulum, plasma membrane 55.07 36.34
VIT_18s0001g06950.t01 Wine grape plasma membrane 54.19 35.24
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 53.74 34.76
VIT_18s0001g06910.t01 Wine grape plasma membrane 53.3 34.47
CDX94594 Canola extracellular, plasma membrane 52.86 34.38
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 53.74 34.17
CDX94595 Canola plasma membrane 52.42 34.1
PGSC0003DMT400054207 Potato plasma membrane 25.55 32.77
KRH52994 Soybean cytosol, nucleus, plasma membrane 49.34 32.46
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 47.58 32.05
Solyc12g087870.1.1 Tomato plasma membrane 49.78 31.74
PGSC0003DMT400005470 Potato extracellular, plasma membrane 47.58 30.51
PGSC0003DMT400036604 Potato extracellular, plasma membrane 45.81 30.32
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 46.7 29.94
PGSC0003DMT400071864 Potato plasma membrane 44.93 29.91
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 43.17 29.79
Solyc07g008440.2.1 Tomato plasma membrane 46.7 28.88
Solyc04g074880.2.1 Tomato plasma membrane 44.93 28.73
TraesCS5A01G247600.1 Wheat plasma membrane 47.14 28.38
KXG35809 Sorghum plasma membrane 48.46 28.28
PGSC0003DMT400005467 Potato plasma membrane 43.61 28.12
TraesCS5B01G244800.1 Wheat plasma membrane 46.26 27.85
TraesCS5D01G254100.1 Wheat plasma membrane 46.26 27.85
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 46.26 26.92
TraesCS2B01G617100.1 Wheat plasma membrane 42.29 26.45
TraesCS5B01G431200.2 Wheat plasma membrane 44.05 25.97
TraesCS5A01G429100.1 Wheat plasma membrane 43.61 25.71
TraesCS5D01G437200.1 Wheat plasma membrane 43.17 25.39
TraesCS5A01G247700.1 Wheat plasma membrane 40.97 24.6
TraesCS5B01G244900.1 Wheat plasma membrane 39.21 23.48
TraesCS5D01G254200.2 Wheat plasma membrane 42.29 23.41
PGSC0003DMT400085139 Potato mitochondrion 39.65 23.26
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 41.41 22.54
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 42.29 22.27
CDY12545 Canola plasma membrane 28.19 21.48
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 28.19 21.4
TraesCS5B01G245000.1 Wheat plasma membrane 22.03 17.99
CDY54350 Canola plasma membrane 25.11 17.17
CDX75141 Canola plasma membrane 25.11 17.17
CDX78835 Canola plasma membrane 29.52 17.14
CDX76826 Canola cytosol, peroxisome, plasma membrane 27.75 16.62
CDY09527 Canola plasma membrane 23.35 16.56
CDY02338 Canola plasma membrane 23.35 16.56
CDY34789 Canola cytosol, peroxisome, plasma membrane 27.31 16.36
CDX99493 Canola plasma membrane 28.19 16.33
CDY09533 Canola plasma membrane 22.91 16.25
CDY14989 Canola plasma membrane 29.52 16.14
CDX71327 Canola plasma membrane 29.52 16.11
CDY08900 Canola plasma membrane 22.03 16.08
CDX76537 Canola plasma membrane 27.31 15.9
CDY08899 Canola cytosol, peroxisome, plasma membrane 26.87 15.64
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 23.79 15.52
CDX90414 Canola plasma membrane 25.55 15.47
CDY08897 Canola plasma membrane 26.43 15.35
CDY01525 Canola plasma membrane 25.55 15.34
CDX76538 Canola plasma membrane 26.43 15.31
CDY08895 Canola plasma membrane 24.67 14.18
CDX76540 Canola plasma membrane 24.67 14.11
CDX78833 Canola cytosol, extracellular, plasma membrane 29.07 13.72
CDY22619 Canola plasma membrane 22.47 13.53
CDY64442 Canola plasma membrane 22.91 13.3
CDX94937 Canola plasma membrane 21.15 12.66
CDY29404 Canola plasma membrane 21.15 12.6
CDY39353 Canola plasma membrane 21.15 12.57
CDX99494 Canola plasma membrane 28.19 12.48
CDY53149 Canola plasma membrane 21.59 12.47
CDX93469 Canola plasma membrane 21.15 12.44
CDY67986 Canola plasma membrane 19.82 12.06
CDY63252 Canola extracellular 22.47 11.81
CDX96651 Canola plasma membrane 21.59 11.58
CDY29403 Canola plasma membrane 19.38 11.43
CDY29401 Canola plasma membrane 17.18 11.34
CDY39352 Canola plasma membrane 19.38 11.28
CDY31805 Canola plasma membrane 21.59 11.06
CDX73177 Canola plasma membrane 19.82 10.64
CDX76536 Canola plasma membrane 13.22 10.24
HORVU7Hr1G086680.1 Barley mitochondrion 7.49 8.85
CDY63702 Canola plasma membrane 22.47 6.65
CDX96650 Canola cytosol, plasma membrane, vacuole 0.44 0.64
Protein Annotations
EnsemblPlants:CDY46618EnsemblPlantsGene:GSBRNA2T00085897001GO:A0A078IBL9GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF1PFAM:PF16913ProteinID:CDY46618ProteinID:CDY46618.1TMHMM:TMhelixUniParc:UPI0004EEDABD
UniProt:A0A078IBL9MapMan:24.2.1.6::::
Description
BnaA09g27450DBnaA09g27450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBL9]
Coordinates
chrLK032679:+:74952..77349
Molecular Weight (calculated)
24621.8 Da
IEP (calculated)
7.815
GRAVY (calculated)
0.837
Length
227 amino acids
Sequence
(BLAST)
001: MVKQTFTPFS INAVVLLTAG TGILALRGGD GERSADVSHK EYVVGFLVTL TAAVLYAFIL PFVELTYKKV RQQITFTLVL EMQLVMCIAA SCFCIVGMLV
101: EGDFKVIPIE AREFKVGGGS AFYYMLILMT GIVYQGLFLG AIGVVFCASS LASGVLISAL LPVTEVLAVV CFREKFQVEK GVALLLSLWG FVSYFYGEFK
201: SGKRIINKTQ LQETELPPLP VSVSAVA
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.