Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39352 | Canola | plasma membrane | 92.47 | 91.28 |
| CDY29404 | Canola | plasma membrane | 81.56 | 82.41 |
| CDY39353 | Canola | plasma membrane | 80.0 | 80.63 |
| AT1G19770.1 | Thale cress | plasma membrane | 74.03 | 72.52 |
| CDX96651 | Canola | plasma membrane | 76.1 | 69.27 |
| CDY67986 | Canola | plasma membrane | 58.7 | 60.59 |
| CDY29401 | Canola | plasma membrane | 54.03 | 60.47 |
| CDY63702 | Canola | plasma membrane | 77.66 | 38.98 |
| CDX73177 | Canola | plasma membrane | 41.04 | 37.35 |
| CDX94937 | Canola | plasma membrane | 31.95 | 32.45 |
| CDX93469 | Canola | plasma membrane | 31.95 | 31.87 |
| CDY53149 | Canola | plasma membrane | 31.69 | 31.04 |
| CDY22619 | Canola | plasma membrane | 30.39 | 31.03 |
| CDY12545 | Canola | plasma membrane | 23.38 | 30.2 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.86 | 29.43 |
| CDX75141 | Canola | plasma membrane | 24.94 | 28.92 |
| CDY54350 | Canola | plasma membrane | 24.94 | 28.92 |
| CDY64442 | Canola | plasma membrane | 28.83 | 28.39 |
| CDY31805 | Canola | plasma membrane | 31.69 | 27.54 |
| CDY63252 | Canola | extracellular | 29.35 | 26.16 |
| CDX90414 | Canola | plasma membrane | 25.19 | 25.87 |
| CDY01525 | Canola | plasma membrane | 25.19 | 25.66 |
| CDY08895 | Canola | plasma membrane | 25.45 | 24.81 |
| CDY08897 | Canola | plasma membrane | 25.19 | 24.81 |
| CDX76540 | Canola | plasma membrane | 25.45 | 24.69 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 24.94 | 24.62 |
| CDX76537 | Canola | plasma membrane | 24.94 | 24.62 |
| CDX99493 | Canola | plasma membrane | 24.94 | 24.49 |
| CDX76538 | Canola | plasma membrane | 24.94 | 24.49 |
| CDX78835 | Canola | plasma membrane | 24.68 | 24.3 |
| CDY14989 | Canola | plasma membrane | 25.97 | 24.1 |
| CDX76536 | Canola | plasma membrane | 18.18 | 23.89 |
| CDX71327 | Canola | plasma membrane | 25.71 | 23.8 |
| CDX90136 | Canola | plasma membrane | 21.04 | 23.01 |
| CDX94594 | Canola | extracellular, plasma membrane | 20.78 | 22.92 |
| CDX94595 | Canola | plasma membrane | 20.52 | 22.64 |
| CDY35722 | Canola | plasma membrane | 20.78 | 22.6 |
| CDY08900 | Canola | plasma membrane | 18.18 | 22.51 |
| CDY15687 | Canola | plasma membrane | 17.66 | 22.44 |
| CDY27947 | Canola | plasma membrane | 19.74 | 21.78 |
| CDY17197 | Canola | extracellular, plasma membrane | 19.74 | 21.65 |
| CDX90135 | Canola | plasma membrane | 17.92 | 21.36 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 26.23 | 21.0 |
| CDY12422 | Canola | plasma membrane | 20.26 | 20.74 |
| CDY29741 | Canola | plasma membrane | 20.26 | 20.69 |
| CDY16284 | Canola | plasma membrane | 20.0 | 20.42 |
| CDY35721 | Canola | plasma membrane | 16.1 | 19.44 |
| CDY46618 | Canola | plasma membrane | 11.43 | 19.38 |
| CDX99494 | Canola | plasma membrane | 25.71 | 19.3 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 18.7 | 19.0 |
| CDY72169 | Canola | plasma membrane | 12.47 | 18.97 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 18.44 | 18.73 |
| CDY09533 | Canola | plasma membrane | 12.99 | 15.62 |
| CDY09527 | Canola | plasma membrane | 12.99 | 15.62 |
| CDY02338 | Canola | plasma membrane | 12.99 | 15.62 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.26 | 0.64 |
Protein Annotations
| EnsemblPlants:CDY29403 | EnsemblPlantsGene:GSBRNA2T00042997001 | GO:A0A078GXS2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF34 | PFAM:PF16913 | ProteinID:CDY29403 | ProteinID:CDY29403.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EF191C | UniProt:A0A078GXS2 | MapMan:24.2.1.6 | : | : | : |
Description
BnaA06g13930DBnaA06g13930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXS2]
Coordinates
chrLK032236:-:357181..358707
Molecular Weight (calculated)
43119.7 Da
IEP (calculated)
9.434
GRAVY (calculated)
0.419
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQTKPEEH FVQVPVSIER DPTTLINSNR KPNHWPTILL STIFAIIGQT IAKLLENLFY EQINRSEYNK RRQNDGVWIQ ALLQTVGFPL LLLPFIILTT
101: KKHNNPPITS DQFHYKSLSV IYICIGILMS VQARLSAMGK LEISFILFTP ISVTQLFFTP IFARFVNKIK FNRWVVISLV FAIGAGALTF TSPFGGVSYN
201: GEHKYARGIW AALFAAICFS LLLCNIQNVF DSYIFKRTES TTRKPSFASV FEVIIFSSLV ATLISTVGLF IAGEQHGLER EMNGFPKGKG AYVMVMVGQA
301: VSWQLYWVGI VGLVFSVSSV LSNVISVVTW PIVSLLVVVF FNFRNFTGEG DDEFDTFKGV AFIPAALSVA AYFFGLHTEN RDSVN
101: KKHNNPPITS DQFHYKSLSV IYICIGILMS VQARLSAMGK LEISFILFTP ISVTQLFFTP IFARFVNKIK FNRWVVISLV FAIGAGALTF TSPFGGVSYN
201: GEHKYARGIW AALFAAICFS LLLCNIQNVF DSYIFKRTES TTRKPSFASV FEVIIFSSLV ATLISTVGLF IAGEQHGLER EMNGFPKGKG AYVMVMVGQA
301: VSWQLYWVGI VGLVFSVSSV LSNVISVVTW PIVSLLVVVF FNFRNFTGEG DDEFDTFKGV AFIPAALSVA AYFFGLHTEN RDSVN
001: MAQNQQPIFQ TKPPEQFVQI PINIERDSST TRMNQTGNTI RKPNHWPTIT ISIIFVIIGQ SIAKLLENFY YDKTNRSEYN ENRQNDGVWT QSLLQTVGFP
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
Arabidopsis Description
PUP14PUP14 [Source:UniProtKB/TrEMBL;Acc:A0A178WHV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.