Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29404 | Canola | plasma membrane | 77.31 | 85.83 |
| CDY39353 | Canola | plasma membrane | 77.07 | 85.34 |
| AT1G19770.1 | Thale cress | plasma membrane | 76.6 | 82.44 |
| CDY29403 | Canola | plasma membrane | 69.27 | 76.1 |
| CDY39352 | Canola | plasma membrane | 69.98 | 75.9 |
| CDY67986 | Canola | plasma membrane | 60.28 | 68.36 |
| CDY29401 | Canola | plasma membrane | 55.08 | 67.73 |
| Bra016495.1-P | Field mustard | plasma membrane | 91.02 | 62.0 |
| CDY63702 | Canola | plasma membrane | 88.89 | 49.02 |
| CDX73177 | Canola | plasma membrane | 37.35 | 37.35 |
| CDX94937 | Canola | plasma membrane | 30.97 | 34.56 |
| CDX93469 | Canola | plasma membrane | 30.73 | 33.68 |
| CDY53149 | Canola | plasma membrane | 31.21 | 33.59 |
| CDY22619 | Canola | plasma membrane | 29.08 | 32.63 |
| CDY64442 | Canola | plasma membrane | 28.84 | 31.2 |
| CDY12545 | Canola | plasma membrane | 21.75 | 30.87 |
| CDY54350 | Canola | plasma membrane | 23.64 | 30.12 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.28 | 30.1 |
| CDY31805 | Canola | plasma membrane | 31.44 | 30.02 |
| CDX75141 | Canola | plasma membrane | 23.4 | 29.82 |
| CDY63252 | Canola | extracellular | 29.55 | 28.94 |
| CDX90414 | Canola | plasma membrane | 23.4 | 26.4 |
| CDY08897 | Canola | plasma membrane | 24.35 | 26.34 |
| CDY01525 | Canola | plasma membrane | 23.4 | 26.19 |
| CDX76538 | Canola | plasma membrane | 24.11 | 26.02 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 23.88 | 25.9 |
| CDX76537 | Canola | plasma membrane | 23.88 | 25.9 |
| CDX99493 | Canola | plasma membrane | 23.4 | 25.26 |
| CDY08895 | Canola | plasma membrane | 23.17 | 24.81 |
| CDX78835 | Canola | plasma membrane | 22.93 | 24.81 |
| CDX76540 | Canola | plasma membrane | 23.17 | 24.69 |
| CDY14989 | Canola | plasma membrane | 24.11 | 24.58 |
| CDX76536 | Canola | plasma membrane | 17.02 | 24.57 |
| CDX90136 | Canola | plasma membrane | 20.33 | 24.43 |
| CDX71327 | Canola | plasma membrane | 23.88 | 24.28 |
| CDY08900 | Canola | plasma membrane | 17.49 | 23.79 |
| CDX94594 | Canola | extracellular, plasma membrane | 19.62 | 23.78 |
| CDX94595 | Canola | plasma membrane | 19.62 | 23.78 |
| CDY35722 | Canola | plasma membrane | 19.86 | 23.73 |
| CDY15687 | Canola | plasma membrane | 16.78 | 23.43 |
| CDY27947 | Canola | plasma membrane | 19.15 | 23.21 |
| CDY17197 | Canola | extracellular, plasma membrane | 19.15 | 23.08 |
| CDX90135 | Canola | plasma membrane | 16.55 | 21.67 |
| CDY46618 | Canola | plasma membrane | 11.58 | 21.59 |
| CDY12422 | Canola | plasma membrane | 18.68 | 21.01 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 23.88 | 21.0 |
| CDY29741 | Canola | plasma membrane | 18.68 | 20.95 |
| CDY16284 | Canola | plasma membrane | 18.44 | 20.69 |
| CDY35721 | Canola | plasma membrane | 15.6 | 20.69 |
| CDY72169 | Canola | plasma membrane | 11.82 | 19.76 |
| CDX99494 | Canola | plasma membrane | 23.4 | 19.3 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 17.02 | 19.0 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 16.78 | 18.73 |
| CDY09533 | Canola | plasma membrane | 12.29 | 16.25 |
| CDY09527 | Canola | plasma membrane | 12.29 | 16.25 |
| CDY02338 | Canola | plasma membrane | 12.06 | 15.94 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 1.89 | 5.1 |
Protein Annotations
| EnsemblPlants:CDX96651 | EnsemblPlantsGene:GSBRNA2T00102856001 | GO:A0A078E5W7 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF34 | PFAM:PF16913 | ProteinID:CDX96651 | ProteinID:CDX96651.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE882A | MapMan:24.2.1.6 | : | : | : | : |
Description
BnaA08g21940D
Coordinates
chrLK031895:-:432571..434308
Molecular Weight (calculated)
47693.0 Da
IEP (calculated)
8.310
GRAVY (calculated)
0.298
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQNQPIFQT KPQEHFVQIP INIERDSTTL INQTGNSNRK PNHWPTILLS TILVIVGQSV AKLLENFYYD QINRSEYDES RQNDGVWTQA LLQTVAFPLL
101: LLPFLNLTAK NRRDQHPSDH FHYKSLTVIY ICIGIVMTVQ ARLSAMGKLE IPFGVFTLIY TTQLFFTPVF ARLVNKIKFN RWVVISLALA IATGALTLSS
201: AFAGEPDEAE ENYARGAWAA LFAGVCFSLL LCNIQNVFDN YIFKRTESRR PSFASVFEVI IFSSLVATII SVAGLLIAGE QDDLKREMNE FSKGKGAYVM
301: AMVGQAVSWQ VYWVGIVGLV FSVSSVLSNV ISVVTWPIVS VLVVIFFNFM DDEFDVFKGV ALITAVLSAA AYFFRLHKEN RDTHVSFVKH IGLYSGPSYV
401: LLFLLVEKRC ELNPRHGFHH PVR
101: LLPFLNLTAK NRRDQHPSDH FHYKSLTVIY ICIGIVMTVQ ARLSAMGKLE IPFGVFTLIY TTQLFFTPVF ARLVNKIKFN RWVVISLALA IATGALTLSS
201: AFAGEPDEAE ENYARGAWAA LFAGVCFSLL LCNIQNVFDN YIFKRTESRR PSFASVFEVI IFSSLVATII SVAGLLIAGE QDDLKREMNE FSKGKGAYVM
301: AMVGQAVSWQ VYWVGIVGLV FSVSSVLSNV ISVVTWPIVS VLVVIFFNFM DDEFDVFKGV ALITAVLSAA AYFFRLHKEN RDTHVSFVKH IGLYSGPSYV
401: LLFLLVEKRC ELNPRHGFHH PVR
001: MAQNQQPIFQ TKPPEQFVQI PINIERDSST TRMNQTGNTI RKPNHWPTIT ISIIFVIIGQ SIAKLLENFY YDKTNRSEYN ENRQNDGVWT QSLLQTVGFP
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
Arabidopsis Description
PUP14PUP14 [Source:UniProtKB/TrEMBL;Acc:A0A178WHV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.