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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 4
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010890.1-P Field mustard plasma membrane 100.0 100.0
CDY35722 Canola plasma membrane 97.44 96.89
AT1G28230.1 Thale cress plasma membrane 86.65 85.67
CDX90135 Canola plasma membrane 69.32 75.54
CDY46618 Canola plasma membrane 48.3 74.89
CDY35721 Canola plasma membrane 66.19 73.04
CDY72169 Canola plasma membrane 50.57 70.36
CDY27947 Canola plasma membrane 67.05 67.62
CDY17197 Canola extracellular, plasma membrane 65.91 66.1
CDY29741 Canola plasma membrane 67.9 63.4
CDY12422 Canola plasma membrane 67.33 63.03
CDY16284 Canola plasma membrane 67.05 62.6
VIT_18s0001g06950.t01 Wine grape plasma membrane 60.51 61.03
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 61.36 60.5
PGSC0003DMT400054207 Potato plasma membrane 30.11 59.89
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 59.66 59.83
VIT_18s0001g06910.t01 Wine grape plasma membrane 59.09 59.26
KRH52994 Soybean cytosol, nucleus, plasma membrane 57.95 59.13
CDX94595 Canola plasma membrane 58.52 59.03
CDX94594 Canola extracellular, plasma membrane 58.52 59.03
KRH72416 Soybean endoplasmic reticulum, plasma membrane 57.1 58.43
CDY15687 Canola plasma membrane 48.58 56.44
PGSC0003DMT400072048 Potato extracellular, plasma membrane 42.61 55.15
PGSC0003DMT400036604 Potato extracellular, plasma membrane 52.84 54.23
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 50.57 54.1
PGSC0003DMT400071864 Potato plasma membrane 51.99 53.67
Solyc12g087870.1.1 Tomato plasma membrane 53.69 53.09
Solyc07g008440.2.1 Tomato plasma membrane 54.83 52.59
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 24.72 51.18
PGSC0003DMT400005470 Potato extracellular, plasma membrane 51.14 50.85
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 50.57 50.28
HORVU5Hr1G069880.1 Barley plasma membrane 37.78 49.26
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 46.59 48.66
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 15.91 47.06
TraesCS5A01G247600.1 Wheat plasma membrane 48.3 45.09
TraesCS5D01G254100.1 Wheat plasma membrane 47.73 44.56
TraesCS5B01G244800.1 Wheat plasma membrane 47.73 44.56
KXG35809 Sorghum plasma membrane 48.86 44.22
TraesCS2B01G617100.1 Wheat plasma membrane 44.89 43.53
PGSC0003DMT400039797 Potato mitochondrion 21.59 43.43
Solyc04g074880.2.1 Tomato plasma membrane 43.75 43.38
PGSC0003DMT400005467 Potato plasma membrane 43.18 43.18
TraesCS5B01G431200.2 Wheat plasma membrane 46.88 42.86
TraesCS5A01G429100.1 Wheat plasma membrane 46.31 42.34
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 46.88 42.31
TraesCS5D01G437200.1 Wheat plasma membrane 46.02 41.97
PGSC0003DMT400085139 Potato mitochondrion 45.45 41.34
TraesCS5B01G245000.1 Wheat plasma membrane 31.53 39.93
TraesCS5A01G247700.1 Wheat plasma membrane 42.33 39.42
TraesCS5B01G244900.1 Wheat plasma membrane 41.48 38.52
TraesCS5D01G254200.2 Wheat plasma membrane 44.03 37.8
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 44.6 37.65
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 45.45 37.12
CDY09527 Canola plasma membrane 29.83 32.81
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 32.39 32.76
CDY12545 Canola plasma membrane 27.56 32.55
CDY09533 Canola plasma membrane 29.55 32.5
CDY02338 Canola plasma membrane 29.26 32.19
CDY08900 Canola plasma membrane 28.41 32.15
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 27.27 32.11
CDY34789 Canola cytosol, peroxisome, plasma membrane 31.53 29.29
CDX76537 Canola plasma membrane 32.39 29.23
HORVU7Hr1G086680.1 Barley mitochondrion 15.91 29.17
CDY08897 Canola plasma membrane 32.39 29.16
CDX90414 Canola plasma membrane 30.97 29.07
CDX76826 Canola cytosol, peroxisome, plasma membrane 31.25 29.02
CDY08899 Canola cytosol, peroxisome, plasma membrane 32.1 28.97
CDY01525 Canola plasma membrane 30.97 28.84
CDX76538 Canola plasma membrane 31.82 28.57
CDX78835 Canola plasma membrane 31.53 28.39
CDX99493 Canola plasma membrane 31.25 28.06
CDY08895 Canola plasma membrane 30.68 27.34
CDX76540 Canola plasma membrane 30.4 26.95
CDY14989 Canola plasma membrane 31.53 26.75
CDY54350 Canola plasma membrane 25.0 26.51
CDX71327 Canola plasma membrane 31.25 26.44
CDX76536 Canola plasma membrane 21.88 26.28
CDX75141 Canola plasma membrane 24.43 25.9
CDX78833 Canola cytosol, extracellular, plasma membrane 32.39 23.7
CDY29404 Canola plasma membrane 25.28 23.36
CDY39353 Canola plasma membrane 24.72 22.77
CDY29401 Canola plasma membrane 21.59 22.09
CDX99494 Canola plasma membrane 31.53 21.64
CDY67986 Canola plasma membrane 22.73 21.45
CDY29403 Canola plasma membrane 23.01 21.04
CDY39352 Canola plasma membrane 23.01 20.77
CDY64442 Canola plasma membrane 23.01 20.72
CDX96651 Canola plasma membrane 24.43 20.33
CDY22619 Canola plasma membrane 21.02 19.63
CDX93469 Canola plasma membrane 21.02 19.17
CDY63252 Canola extracellular 23.3 18.98
CDX94937 Canola plasma membrane 20.17 18.73
CDY53149 Canola plasma membrane 20.74 18.58
CDX73177 Canola plasma membrane 21.31 17.73
CDY31805 Canola plasma membrane 20.74 16.48
CDY63702 Canola plasma membrane 25.0 11.47
CDX96650 Canola cytosol, plasma membrane, vacuole 0.28 0.64
Protein Annotations
EnsemblPlants:CDX90136EnsemblPlantsGene:GSBRNA2T00150661001GO:A0A078DLI3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF1PFAM:PF16913ProteinID:CDX90136ProteinID:CDX90136.1SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI00025456BAMapMan:24.2.1.6:::
Description
BnaA08g18480D
Coordinates
chrLK031862:-:257602..259493
Molecular Weight (calculated)
38779.4 Da
IEP (calculated)
8.614
GRAVY (calculated)
0.744
Length
352 amino acids
Sequence
(BLAST)
001: MKNGLIIISC VILTIGTCGG PLLTRLYYTN GGKRIWFMSF LSTAGFPVIL VPLFFSFLSR RNRNNSETAE KPKLILMETP LFIASIVIGL LTGLDNYLYA
101: YGLAYLPVST SSLIIGTQLA FNALFAFFMV KQKFTPFSIN AVVLLTVGIV VLALHSSGDK PANETHKEYV VGFLMTVIAA VLYAFILPLV ELTYKKARQE
201: ITFPLVLEIQ MVMCLAATCF CVVGMIIDGD FKVISREARE FKIGGSAFYY TLIMITGIVW QGFFLGAIGV VFCASSLASA VLISVLLPVT EVLAVICFRE
301: KFQAEKGVSL FLSIWGFVSY FYGEYKSGKK VLEKHQPPET ELPPLQVSDS VA
Best Arabidopsis Sequence Match ( AT1G28230.1 )
(BLAST)
001: MKNGLIIINC IILTIGTCGG PLLTRLYFTN GGKRIWFMSF LSTAGFPIIL IPLLVSFLSR RRSNRNPNNA ENKRKTKLFL METPLFIASI VIGLLTGLDN
101: YLYSYGLAYL PVSTSSLIIG TQLAFNALFA FLLVKQKFTP FSINAVVLLT VGIGILALHS DGDKPAKESK KEYVVGFLMT VVAALLYAFI LPLVELTYKK
201: ARQEITFPLV LEIQMVMCLA ATFFCVIGMF IVGDFKVIAR EAREFKIGGS VFYYALIVIT GIIWQGFFLG AIGIVFCASS LASGVLISVL LPVTEVFAVV
301: CFREKFQAEK GVSLLLSLWG FVSYFYGEFK SGKKVVDKPQ PPETELPILP VSDYVA
Arabidopsis Description
PUP1Purine permease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ96]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.