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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • golgi 4
  • plasma membrane 6
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90136 Canola plasma membrane 70.36 50.57
CDY35722 Canola plasma membrane 70.36 50.28
AT1G28230.1 Thale cress plasma membrane 69.17 49.16
PGSC0003DMT400054207 Potato plasma membrane 33.6 48.02
CDX90135 Canola plasma membrane 60.87 47.68
CDY46618 Canola plasma membrane 41.11 45.81
CDY35721 Canola plasma membrane 57.31 45.45
CDY27947 Canola plasma membrane 57.71 41.83
CDY17197 Canola extracellular, plasma membrane 57.31 41.31
CDY12422 Canola plasma membrane 60.47 40.69
CDY29741 Canola plasma membrane 59.68 40.05
CDY16284 Canola plasma membrane 59.68 40.05
CDX94595 Canola plasma membrane 51.78 37.54
CDX94594 Canola extracellular, plasma membrane 51.38 37.25
TraesCS5B01G245000.1 Wheat plasma membrane 40.32 36.69
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 50.59 36.47
VIT_18s0001g06950.t01 Wine grape plasma membrane 50.2 36.39
VIT_18s0001g06910.t01 Wine grape plasma membrane 50.2 36.18
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 50.2 35.57
PGSC0003DMT400071864 Potato plasma membrane 46.25 34.31
KRH52994 Soybean cytosol, nucleus, plasma membrane 46.64 34.2
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 43.87 33.74
KRH72416 Soybean endoplasmic reticulum, plasma membrane 45.85 33.72
PGSC0003DMT400036604 Potato extracellular, plasma membrane 44.27 32.65
Solyc12g087870.1.1 Tomato plasma membrane 45.85 32.58
Solyc07g008440.2.1 Tomato plasma membrane 47.04 32.43
CDY15687 Canola plasma membrane 38.34 32.01
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 43.87 31.36
PGSC0003DMT400005470 Potato extracellular, plasma membrane 43.87 31.36
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 40.32 30.27
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 41.11 29.89
PGSC0003DMT400072048 Potato extracellular, plasma membrane 31.62 29.41
TraesCS2B01G617100.1 Wheat plasma membrane 41.9 29.2
Solyc04g074880.2.1 Tomato plasma membrane 39.53 28.17
HORVU5Hr1G069880.1 Barley plasma membrane 30.04 28.15
TraesCS5B01G244800.1 Wheat plasma membrane 41.5 27.85
TraesCS5D01G254100.1 Wheat plasma membrane 41.5 27.85
TraesCS5A01G247600.1 Wheat plasma membrane 41.5 27.85
KXG35809 Sorghum plasma membrane 42.69 27.76
TraesCS5B01G244900.1 Wheat plasma membrane 41.11 27.44
PGSC0003DMT400005467 Potato plasma membrane 37.94 27.27
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 41.9 27.18
TraesCS5B01G431200.2 Wheat plasma membrane 40.71 26.75
TraesCS5A01G429100.1 Wheat plasma membrane 40.71 26.75
TraesCS5A01G247700.1 Wheat plasma membrane 39.92 26.72
TraesCS5D01G437200.1 Wheat plasma membrane 39.53 25.91
TraesCS5D01G254200.2 Wheat plasma membrane 40.71 25.12
PGSC0003DMT400085139 Potato mitochondrion 38.34 25.06
CDY09527 Canola plasma membrane 31.23 24.69
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 41.9 24.59
HORVU7Hr1G086680.1 Barley mitochondrion 18.58 24.48
CDY09533 Canola plasma membrane 30.83 24.38
CDY02338 Canola plasma membrane 30.43 24.06
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 39.53 23.98
CDY12545 Canola plasma membrane 27.67 23.49
CDX76536 Canola plasma membrane 26.88 23.21
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 27.27 23.08
CDY08900 Canola plasma membrane 26.48 21.54
CDY14989 Canola plasma membrane 32.41 19.76
CDX71327 Canola plasma membrane 32.02 19.47
CDX78835 Canola plasma membrane 29.25 18.93
CDX99493 Canola plasma membrane 29.25 18.88
CDX90414 Canola plasma membrane 27.67 18.67
CDY01525 Canola plasma membrane 27.67 18.52
CDX76826 Canola cytosol, peroxisome, plasma membrane 27.67 18.47
CDY34789 Canola cytosol, peroxisome, plasma membrane 27.27 18.21
CDX76537 Canola plasma membrane 28.06 18.21
CDY08897 Canola plasma membrane 28.06 18.16
CDY08899 Canola cytosol, peroxisome, plasma membrane 27.67 17.95
CDX76538 Canola plasma membrane 27.67 17.86
CDY08895 Canola plasma membrane 27.67 17.72
CDX76540 Canola plasma membrane 27.67 17.63
CDY54350 Canola plasma membrane 22.53 17.17
CDX75141 Canola plasma membrane 22.13 16.87
PGSC0003DMT400039797 Potato mitochondrion 10.28 14.86
CDX78833 Canola cytosol, extracellular, plasma membrane 27.67 14.55
CDY29404 Canola plasma membrane 20.55 13.65
CDY39353 Canola plasma membrane 20.55 13.61
CDX99494 Canola plasma membrane 27.27 13.45
CDY67986 Canola plasma membrane 19.76 13.4
CDY53149 Canola plasma membrane 20.55 13.23
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 8.7 12.94
CDY29401 Canola plasma membrane 17.39 12.79
CDY39352 Canola plasma membrane 19.37 12.56
CDY29403 Canola plasma membrane 18.97 12.47
CDX96651 Canola plasma membrane 19.76 11.82
CDY31805 Canola plasma membrane 20.55 11.74
CDY22619 Canola plasma membrane 17.39 11.67
CDY64442 Canola plasma membrane 17.39 11.25
CDX94937 Canola plasma membrane 16.6 11.08
CDX93469 Canola plasma membrane 16.6 10.88
CDY63252 Canola extracellular 17.79 10.42
CDX73177 Canola plasma membrane 16.21 9.69
CDY63702 Canola plasma membrane 20.55 6.78
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 1.98 4.2
CDX96650 Canola cytosol, plasma membrane, vacuole 0.0 0.0
Protein Annotations
MapMan:24.2.1.6GO:A0A078JZP3UniProt:A0A078JZP3EnsemblPlants:CDY72169ProteinID:CDY72169ProteinID:CDY72169.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00025523001PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF1InterPro:PUP_plant
SUPFAM:SSF103481SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EE19FBSEG:seg:
Description
BnaCnng76300DBnaCnng76300D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZP3]
Coordinates
chrLK049394:-:3..761
Molecular Weight (calculated)
28022.9 Da
IEP (calculated)
6.957
GRAVY (calculated)
0.687
Length
253 amino acids
Sequence
(BLAST)
001: MKNGLLVLIC MILAIGTCGG PLLTRLYYNN GGERIWFMSF ISTAGCPVTF IPLVLSFLRR RNRNNSENID KTEIVLMETP MFMASIVIGL LIGLDNYCFA
101: YGLAYLPVST TSLIVGTQLG FNAIFSFFMV KQTFTPFSIN AVVLLTAGTG ILALRGGDGD RPADVSHKEY VVGFLVTLTA AVLYAFILPF VELTCKKVRQ
201: EITFTLVLEM QLVMCLAASC FCIFGMLVEG DFKVNKESDL YSIFKYPNET FCL
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.