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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90136 Canola plasma membrane 96.89 97.44
AT1G28230.1 Thale cress plasma membrane 87.29 86.8
CDX90135 Canola plasma membrane 69.49 76.16
CDY46618 Canola plasma membrane 48.02 74.89
CDY35721 Canola plasma membrane 66.67 73.98
CDY72169 Canola plasma membrane 50.28 70.36
CDY27947 Canola plasma membrane 67.23 68.19
CDY17197 Canola extracellular, plasma membrane 66.1 66.67
CDY29741 Canola plasma membrane 68.36 64.19
CDY12422 Canola plasma membrane 67.8 63.83
CDY16284 Canola plasma membrane 67.51 63.4
VIT_18s0001g06950.t01 Wine grape plasma membrane 60.17 61.03
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 61.02 60.5
CDX94595 Canola plasma membrane 59.6 60.46
CDX94594 Canola extracellular, plasma membrane 59.6 60.46
PGSC0003DMT400054207 Potato plasma membrane 30.23 60.45
KRH52994 Soybean cytosol, nucleus, plasma membrane 57.91 59.42
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 58.76 59.26
VIT_18s0001g06910.t01 Wine grape plasma membrane 58.76 59.26
KRH72416 Soybean endoplasmic reticulum, plasma membrane 57.06 58.72
CDY15687 Canola plasma membrane 49.15 57.43
PGSC0003DMT400072048 Potato extracellular, plasma membrane 42.37 55.15
PGSC0003DMT400036604 Potato extracellular, plasma membrane 53.11 54.81
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 50.85 54.71
PGSC0003DMT400071864 Potato plasma membrane 52.54 54.55
Solyc12g087870.1.1 Tomato plasma membrane 54.52 54.21
Solyc07g008440.2.1 Tomato plasma membrane 55.65 53.68
PGSC0003DMT400005470 Potato extracellular, plasma membrane 52.54 52.54
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 25.14 52.35
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 51.98 51.98
HORVU5Hr1G069880.1 Barley plasma membrane 37.29 48.89
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 16.38 48.74
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 45.48 47.77
TraesCS5A01G247600.1 Wheat plasma membrane 48.02 45.09
TraesCS5B01G244800.1 Wheat plasma membrane 48.02 45.09
TraesCS5D01G254100.1 Wheat plasma membrane 48.02 45.09
Solyc04g074880.2.1 Tomato plasma membrane 44.63 44.51
PGSC0003DMT400005467 Potato plasma membrane 44.07 44.32
PGSC0003DMT400039797 Potato mitochondrion 21.75 44.0
KXG35809 Sorghum plasma membrane 48.31 43.96
TraesCS2B01G617100.1 Wheat plasma membrane 44.63 43.53
TraesCS5B01G431200.2 Wheat plasma membrane 46.89 43.12
TraesCS5A01G429100.1 Wheat plasma membrane 46.61 42.86
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 46.89 42.56
TraesCS5D01G437200.1 Wheat plasma membrane 46.33 42.49
PGSC0003DMT400085139 Potato mitochondrion 46.33 42.38
TraesCS5B01G245000.1 Wheat plasma membrane 31.92 40.65
TraesCS5A01G247700.1 Wheat plasma membrane 42.66 39.95
TraesCS5B01G244900.1 Wheat plasma membrane 41.81 39.05
TraesCS5D01G254200.2 Wheat plasma membrane 44.35 38.29
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 44.63 37.89
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 45.76 37.59
CDY12545 Canola plasma membrane 27.97 33.22
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 27.68 32.78
CDY09527 Canola plasma membrane 29.38 32.5
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 31.92 32.47
CDY09533 Canola plasma membrane 29.1 32.19
CDY02338 Canola plasma membrane 28.81 31.88
CDY08900 Canola plasma membrane 27.97 31.83
CDX76537 Canola plasma membrane 32.2 29.23
HORVU7Hr1G086680.1 Barley mitochondrion 15.82 29.17
CDY08899 Canola cytosol, peroxisome, plasma membrane 31.92 28.97
CDY08897 Canola plasma membrane 31.92 28.9
CDY34789 Canola cytosol, peroxisome, plasma membrane 30.79 28.76
CDX90414 Canola plasma membrane 30.23 28.53
CDX76826 Canola cytosol, peroxisome, plasma membrane 30.51 28.5
CDX76538 Canola plasma membrane 31.36 28.32
CDY01525 Canola plasma membrane 30.23 28.31
CDX78835 Canola plasma membrane 31.07 28.13
CDX99493 Canola plasma membrane 30.79 27.81
CDY14989 Canola plasma membrane 31.92 27.23
CDX71327 Canola plasma membrane 31.64 26.92
CDY08895 Canola plasma membrane 29.66 26.58
CDY54350 Canola plasma membrane 24.58 26.2
CDX76540 Canola plasma membrane 29.38 26.2
CDX75141 Canola plasma membrane 24.01 25.6
CDX76536 Canola plasma membrane 21.19 25.6
CDX78833 Canola cytosol, extracellular, plasma membrane 31.92 23.49
CDY29404 Canola plasma membrane 24.58 22.83
CDY39353 Canola plasma membrane 24.01 22.25
CDY29401 Canola plasma membrane 21.19 21.8
CDX99494 Canola plasma membrane 31.07 21.44
CDY67986 Canola plasma membrane 22.32 21.18
CDY29403 Canola plasma membrane 22.6 20.78
CDY39352 Canola plasma membrane 22.6 20.51
CDY64442 Canola plasma membrane 22.03 19.95
CDX96651 Canola plasma membrane 23.73 19.86
CDY22619 Canola plasma membrane 20.62 19.36
CDX93469 Canola plasma membrane 20.9 19.17
CDX94937 Canola plasma membrane 20.06 18.73
CDY53149 Canola plasma membrane 20.34 18.32
CDY63252 Canola extracellular 22.32 18.29
CDX73177 Canola plasma membrane 20.62 17.26
CDY31805 Canola plasma membrane 20.34 16.25
CDY63702 Canola plasma membrane 24.29 11.21
CDX96650 Canola cytosol, plasma membrane, vacuole 0.28 0.64
Protein Annotations
EnsemblPlants:CDY35722EnsemblPlantsGene:GSBRNA2T00059148001GO:A0A078HD20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF1PFAM:PF16913ProteinID:CDY35722ProteinID:CDY35722.1SUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI0004EECDB6UniProt:A0A078HD20MapMan:24.2.1.6:::
Description
BnaC03g58430DBnaC03g58430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD20]
Coordinates
chrLK032359:-:43540..45135
Molecular Weight (calculated)
39080.6 Da
IEP (calculated)
8.615
GRAVY (calculated)
0.710
Length
354 amino acids
Sequence
(BLAST)
001: MKNGLIIINC VILTIGTCGG PLLTRLYYTN GGKRIWFMSF LSTAGFPVIL IPLFFSFLSR RNHNRNNSET AEKTKLILME TPLFIASIVI GLLTGLDNYL
101: YAYGLAYLPV STSSLIIGTQ LAFNALFAFF MVKQKFTPFS INAVVLLTVG IVVLALHSNG DKPANETHKE YVVGFLMTVI AAVLYAFILP LVEFTYKKAR
201: QEITFPLVLE IQMVMCIAAT CFCVVGMIID GDFKVISREA REFKIGGSAF YYTLIVITGI VWQGFFLGAI GVVFCASSLA SGVLISVLLP VTEVLAVICF
301: REKFQAEKGV SLFLSIWGFV SYFYGEYKSG KKVLEKHQPP ETELPSLQVS DSVA
Best Arabidopsis Sequence Match ( AT1G28230.1 )
(BLAST)
001: MKNGLIIINC IILTIGTCGG PLLTRLYFTN GGKRIWFMSF LSTAGFPIIL IPLLVSFLSR RRSNRNPNNA ENKRKTKLFL METPLFIASI VIGLLTGLDN
101: YLYSYGLAYL PVSTSSLIIG TQLAFNALFA FLLVKQKFTP FSINAVVLLT VGIGILALHS DGDKPAKESK KEYVVGFLMT VVAALLYAFI LPLVELTYKK
201: ARQEITFPLV LEIQMVMCLA ATFFCVIGMF IVGDFKVIAR EAREFKIGGS VFYYALIVIT GIIWQGFFLG AIGIVFCASS LASGVLISVL LPVTEVFAVV
301: CFREKFQAEK GVSLLLSLWG FVSYFYGEFK SGKKVVDKPQ PPETELPILP VSDYVA
Arabidopsis Description
PUP1Purine permease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ96]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.