Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18220.1 | CDX95295 | AT2G13650.1 | 15299147 |
| AT4G18220.1 | CDY39936 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08900 | Canola | plasma membrane | 76.45 | 72.03 |
| Bra021018.1-P | Field mustard | plasma membrane | 93.86 | 69.1 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 85.32 | 64.1 |
| CDX76537 | Canola | plasma membrane | 84.64 | 63.59 |
| CDY08897 | Canola | plasma membrane | 83.28 | 62.4 |
| CDX99493 | Canola | plasma membrane | 82.59 | 61.73 |
| CDX78835 | Canola | plasma membrane | 81.91 | 61.38 |
| CDX76538 | Canola | plasma membrane | 80.89 | 60.46 |
| AT4G18210.1 | Thale cress | plasma membrane | 78.84 | 59.23 |
| AT4G18220.1 | Thale cress | plasma membrane | 77.82 | 58.46 |
| KRH45390 | Soybean | plasma membrane | 46.76 | 42.81 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 51.88 | 41.08 |
| CDY08895 | Canola | plasma membrane | 53.24 | 39.49 |
| CDX76540 | Canola | plasma membrane | 53.24 | 39.29 |
| CDY01525 | Canola | plasma membrane | 50.51 | 39.15 |
| CDX90414 | Canola | plasma membrane | 49.49 | 38.67 |
| KRH46353 | Soybean | plasma membrane | 51.54 | 36.39 |
| KRG98518 | Soybean | plasma membrane | 51.19 | 36.23 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 34.81 | 34.11 |
| CDY12545 | Canola | plasma membrane | 34.47 | 33.89 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 49.49 | 32.88 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 41.3 | 31.93 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 41.3 | 31.35 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 41.3 | 30.87 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 40.96 | 30.38 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 40.61 | 30.36 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 39.59 | 29.97 |
| CDY14989 | Canola | plasma membrane | 40.96 | 28.92 |
| CDX71327 | Canola | plasma membrane | 40.61 | 28.61 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 46.42 | 28.27 |
| Solyc02g071100.2.1 | Tomato | nucleus | 35.84 | 28.0 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 35.49 | 27.59 |
| CDY72169 | Canola | plasma membrane | 23.21 | 26.88 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 34.13 | 26.67 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 34.47 | 26.65 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 35.49 | 26.46 |
| CDX99494 | Canola | plasma membrane | 46.08 | 26.32 |
| CDY54350 | Canola | plasma membrane | 29.69 | 26.2 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 21.5 | 25.71 |
| CDX75141 | Canola | plasma membrane | 28.67 | 25.3 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 21.5 | 25.3 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 35.15 | 24.52 |
| CDY17197 | Canola | extracellular, plasma membrane | 27.65 | 23.08 |
| CDY27947 | Canola | plasma membrane | 27.3 | 22.92 |
| CDX90136 | Canola | plasma membrane | 26.28 | 21.88 |
| CDX94594 | Canola | extracellular, plasma membrane | 25.94 | 21.78 |
| CDX94595 | Canola | plasma membrane | 25.6 | 21.49 |
| CDY12422 | Canola | plasma membrane | 27.3 | 21.28 |
| CDY09527 | Canola | plasma membrane | 23.21 | 21.25 |
| CDY16284 | Canola | plasma membrane | 27.3 | 21.22 |
| CDY35722 | Canola | plasma membrane | 25.6 | 21.19 |
| CDY29741 | Canola | plasma membrane | 26.96 | 20.95 |
| CDY09533 | Canola | plasma membrane | 22.87 | 20.94 |
| CDY15687 | Canola | plasma membrane | 21.5 | 20.79 |
| CDY02338 | Canola | plasma membrane | 22.53 | 20.62 |
| CDY29404 | Canola | plasma membrane | 25.6 | 19.68 |
| CDY67986 | Canola | plasma membrane | 24.91 | 19.57 |
| CDY29401 | Canola | plasma membrane | 22.53 | 19.19 |
| CDY39353 | Canola | plasma membrane | 24.91 | 19.11 |
| CDY53149 | Canola | plasma membrane | 25.26 | 18.83 |
| CDY39352 | Canola | plasma membrane | 24.57 | 18.46 |
| CDY29403 | Canola | plasma membrane | 23.89 | 18.18 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 22.87 | 17.68 |
| CDX94937 | Canola | plasma membrane | 22.53 | 17.41 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 22.53 | 17.41 |
| CDY22619 | Canola | plasma membrane | 22.18 | 17.24 |
| CDY64442 | Canola | plasma membrane | 22.87 | 17.14 |
| CDX96651 | Canola | plasma membrane | 24.57 | 17.02 |
| CDY31805 | Canola | plasma membrane | 25.6 | 16.93 |
| CDX93469 | Canola | plasma membrane | 21.84 | 16.58 |
| CDY63252 | Canola | extracellular | 22.87 | 15.51 |
| CDX90135 | Canola | plasma membrane | 16.72 | 15.17 |
| CDY35721 | Canola | plasma membrane | 16.04 | 14.73 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 7.51 | 14.57 |
| CDY46618 | Canola | plasma membrane | 10.24 | 13.22 |
| CDX73177 | Canola | plasma membrane | 17.41 | 12.06 |
| CDY63702 | Canola | plasma membrane | 23.55 | 9.0 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.6 | GO:A0A078CH60 | EnsemblPlants:CDX76536 | ProteinID:CDX76536 | ProteinID:CDX76536.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00126964001 | PFAM:PF16913 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF17 | InterPro:PUP_plant | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0004EE3D68 | SEG:seg | : | : | : |
Description
BnaA08g08640D
Coordinates
chrLK031807:-:1920336..1921888
Molecular Weight (calculated)
32200.3 Da
IEP (calculated)
9.551
GRAVY (calculated)
0.327
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDQELQVI VQQGKELNPT VQDEINSVGN NQTGVPHSNT YKRWLRVIAY TFFVISGQSV AAILGRLYYD NGGKSKWLAT VVQLVGFPVL LPYHLLSIKT
101: HATTHTDSKS ASPRNRVLVY VVLGVLVGAG CYLYSIGLLY LPVSTFSLIC ASQLAFNAFF SYFLNSQKLT PIILNSLLLL TISSTLLAFN NEESNFKKVT
201: RGQYVTSFIC TIGASAGFGL VLSVAFRKVL KRQTFSEVMD LIIYVNLVAS CVSLVGLFAS GEWKTLSSEM DSYKLGKRFR AACGSCTGCH HFP
101: HATTHTDSKS ASPRNRVLVY VVLGVLVGAG CYLYSIGLLY LPVSTFSLIC ASQLAFNAFF SYFLNSQKLT PIILNSLLLL TISSTLLAFN NEESNFKKVT
201: RGQYVTSFIC TIGASAGFGL VLSVAFRKVL KRQTFSEVMD LIIYVNLVAS CVSLVGLFAS GEWKTLSSEM DSYKLGKRFR AACGSCTGCH HFP
001: MEITQVIYVN DHNNIEANLT GQEEMNTTME IESSSVPQSK NYKKWLRISI YVFFVLACQA LSTILGRVYY ENGGKSTWMG TLVQLIGFPV LFLFRFFSQT
101: KNPKPTEADF RKFSSFTILG SVYIVTGLLV SANSYMSSVG LLYLPVSTFS LILASQLAFT AFFSYFLNSQ KFTPFIVNSL FLLTISSALL VVNTDSENTA
201: KVSRVKYVIG IICTIGASAG IGLLLSLVQL ILRKVLKKQT FSTVTDLVAY QSLVASCVVL IGLFASGEWK TLTSEMENYK LGKVPYVMTL ASIAISWQVY
301: TIGVVGLIFE SSSVFSNSIT AVGLPIVPVV AVIVFHDKMN ASKIFSIILA IWGFISFVYQ HYLDEKKLKT SHTSPVGDPH LLPAEEGHTN IHSV
101: KNPKPTEADF RKFSSFTILG SVYIVTGLLV SANSYMSSVG LLYLPVSTFS LILASQLAFT AFFSYFLNSQ KFTPFIVNSL FLLTISSALL VVNTDSENTA
201: KVSRVKYVIG IICTIGASAG IGLLLSLVQL ILRKVLKKQT FSTVTDLVAY QSLVASCVVL IGLFASGEWK TLTSEMENYK LGKVPYVMTL ASIAISWQVY
301: TIGVVGLIFE SSSVFSNSIT AVGLPIVPVV AVIVFHDKMN ASKIFSIILA IWGFISFVYQ HYLDEKKLKT SHTSPVGDPH LLPAEEGHTN IHSV
Arabidopsis Description
PUP8Probable purine permease 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.