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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93469 Canola plasma membrane 95.51 93.78
AT1G09860.1 Thale cress plasma membrane 81.27 80.42
CDY22619 Canola plasma membrane 79.68 80.11
CDY53149 Canola plasma membrane 62.01 59.8
CDY31805 Canola plasma membrane 62.8 53.72
CDY64442 Canola plasma membrane 43.27 41.94
CDY63252 Canola extracellular 43.27 37.96
CDY29404 Canola plasma membrane 34.83 34.65
CDY39353 Canola plasma membrane 34.04 33.77
CDY39352 Canola plasma membrane 32.98 32.05
CDY29403 Canola plasma membrane 32.45 31.95
CDY12545 Canola plasma membrane 25.07 31.88
CDY29401 Canola plasma membrane 28.76 31.69
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 24.54 31.1
CDX96651 Canola plasma membrane 34.56 30.97
CDY67986 Canola plasma membrane 30.34 30.83
CDX75141 Canola plasma membrane 25.33 28.92
CDY54350 Canola plasma membrane 25.07 28.61
CDY14989 Canola plasma membrane 27.18 24.82
CDX71327 Canola plasma membrane 26.91 24.52
CDY01525 Canola plasma membrane 24.27 24.34
CDX90414 Canola plasma membrane 24.01 24.27
CDX76537 Canola plasma membrane 24.8 24.1
CDY08899 Canola cytosol, peroxisome, plasma membrane 24.54 23.85
CDX78835 Canola plasma membrane 24.54 23.79
CDX99493 Canola plasma membrane 24.54 23.72
CDY08900 Canola plasma membrane 19.26 23.47
CDX76538 Canola plasma membrane 24.27 23.47
CDX76536 Canola plasma membrane 17.41 22.53
CDX73177 Canola plasma membrane 25.07 22.46
CDY08897 Canola plasma membrane 22.96 22.25
CDY17197 Canola extracellular, plasma membrane 20.05 21.65
CDY08895 Canola plasma membrane 22.43 21.52
CDY29741 Canola plasma membrane 21.37 21.49
CDY12422 Canola plasma membrane 21.11 21.28
CDY27947 Canola plasma membrane 19.53 21.2
CDX76540 Canola plasma membrane 22.16 21.16
CDY46618 Canola plasma membrane 12.66 21.15
CDX78833 Canola cytosol, extracellular, plasma membrane 26.65 21.0
CDX90135 Canola plasma membrane 17.68 20.74
CDY16284 Canola plasma membrane 20.58 20.69
CDY15687 Canola plasma membrane 16.36 20.46
CDY35721 Canola plasma membrane 17.15 20.38
CDX94594 Canola extracellular, plasma membrane 18.73 20.34
CDX90136 Canola plasma membrane 18.73 20.17
CDX94595 Canola plasma membrane 18.47 20.06
CDY35722 Canola plasma membrane 18.73 20.06
CDX99494 Canola plasma membrane 26.91 19.88
CDX76826 Canola cytosol, peroxisome, plasma membrane 17.15 17.15
CDY63702 Canola plasma membrane 34.3 16.95
CDY34789 Canola cytosol, peroxisome, plasma membrane 16.89 16.89
CDY09527 Canola plasma membrane 14.25 16.88
CDY72169 Canola plasma membrane 11.08 16.6
CDY09533 Canola plasma membrane 13.98 16.56
CDY02338 Canola plasma membrane 13.98 16.56
CDX96650 Canola cytosol, plasma membrane, vacuole 0.53 1.27
Protein Annotations
EnsemblPlants:CDX94937EnsemblPlantsGene:GSBRNA2T00100418001GO:A0A078E1D8GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF34PFAM:PF16913ProteinID:CDX94937ProteinID:CDX94937.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE798BMapMan:24.2.1.6::::
Description
BnaC05g07340D
Coordinates
chrLK031886:+:272641..273780
Molecular Weight (calculated)
43114.9 Da
IEP (calculated)
9.310
GRAVY (calculated)
0.333
Length
379 amino acids
Sequence
(BLAST)
001: MEEFQGPEPG RHNTSEIRSQ RKWWISVFFC GFLVLTGDSL VMLLLNFYYV QNNRSENDQY QQYRGTWTQA LIQNVAFPIL IPLFFILPKP ETVSDQTNTR
101: HPPFLRVLLL YLSLGVLVSV YSKLYALARL YVGWGILVPA QLILTSLFSA FINRLKFNRW IIISIIFTLA ADFFCAPAFS GTPTEDESYT YGIKAWLILI
201: FPTLAFSLSL SLTQLGFERV LAKTKRYGGS NKKVFRMVLE MQIFVSFVAT LICLVGLFVS GEFKELKGES ERFKKGRTYY SLSLVGLALS WQVWAVGLLG
301: LVLSVSGLFA DVVHMCASPV VALLVVLAFD FKDDDFGWQR RGALLGSVLA LACYFYYLHK TKKKEMAELN KRDNNSEEA
Best Arabidopsis Sequence Match ( AT1G09860.1 )
(BLAST)
001: MEEFQGPEPR GQMMSENPRS LELNQRKWWI SVFICGFLIF AGDSLVMLLL NFFYVQDNRS ESDQDRQYKG TWTQALIQNA AFPILIPFFF ILSSPKPNPE
101: TVSNQTNNGW FRVLSLYVSL GVLVSVYSKL YALGKLYVGW GILLSTQLIL TSLFSAFINR LKFNRWIIIS IIFTLGADFF GGPAFAGTPN EDETDPYDIK
201: AWLILIFPTL AFSLSLCLMQ LGFDKVLVKT KRYGNKKVFR MVLEMQICVS FIATLICTVG LFASGEFKEL KGDSERFKKG KTYYILSLVG LALSWQVWAV
301: GLLGLVLLVS GLFADVVHMG ASPVVALLVV LAFDFMDDEF GWQRRGALLG AVLALASYFY SLHTKKKKEI AELNKRENNN SEA
Arabidopsis Description
PUP16Probable purine permease 16 [Source:UniProtKB/Swiss-Prot;Acc:O04508]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.