Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 97.1 | 97.1 |
| AT2G24220.2 | Thale cress | plasma membrane | 87.86 | 87.86 |
| PGSC0003DMT400028938 | Potato | cytosol, endoplasmic reticulum, plasma membrane | 65.17 | 69.38 |
| VIT_11s0016g00010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 63.32 | 67.8 |
| KRH26102 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 63.32 | 66.12 |
| KRH54954 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 62.8 | 65.93 |
| Solyc07g005660.2.1 | Tomato | plasma membrane | 56.73 | 65.55 |
| Os09t0557500-01 | Rice | cytosol, peroxisome, plastid | 60.16 | 58.76 |
| Zm00001d006327_P001 | Maize | cytosol, peroxisome, plasma membrane | 57.26 | 57.71 |
| GSMUA_Achr1P26440_001 | Banana | plasma membrane | 40.11 | 55.68 |
| OQU89926 | Sorghum | mitochondrion, plasma membrane | 58.31 | 54.57 |
| TraesCS5A01G358700.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 57.52 | 54.5 |
| HORVU5Hr1G088530.5 | Barley | cytosol, endoplasmic reticulum, peroxisome | 58.31 | 53.51 |
| TraesCS5B01G361100.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 57.78 | 53.16 |
| TraesCS5D01G367700.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 56.99 | 51.55 |
| CDY27947 | Canola | plasma membrane | 29.02 | 31.52 |
| CDX90136 | Canola | plasma membrane | 29.02 | 31.25 |
| CDY17197 | Canola | extracellular, plasma membrane | 28.76 | 31.05 |
| CDY35722 | Canola | plasma membrane | 28.5 | 30.51 |
| CDX94595 | Canola | plasma membrane | 27.97 | 30.37 |
| CDX94594 | Canola | extracellular, plasma membrane | 27.97 | 30.37 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.75 | 30.1 |
| CDY29741 | Canola | plasma membrane | 29.55 | 29.71 |
| CDY16284 | Canola | plasma membrane | 29.55 | 29.71 |
| CDY12545 | Canola | plasma membrane | 23.22 | 29.53 |
| CDY12422 | Canola | plasma membrane | 29.29 | 29.52 |
| CDY15687 | Canola | plasma membrane | 23.48 | 29.37 |
| CDX90135 | Canola | plasma membrane | 24.54 | 28.79 |
| CDY35721 | Canola | plasma membrane | 23.75 | 28.21 |
| CDY46618 | Canola | plasma membrane | 16.62 | 27.75 |
| CDY72169 | Canola | plasma membrane | 18.47 | 27.67 |
| CDY08900 | Canola | plasma membrane | 22.69 | 27.65 |
| CDY01525 | Canola | plasma membrane | 26.65 | 26.72 |
| CDX76538 | Canola | plasma membrane | 26.91 | 26.02 |
| CDY08897 | Canola | plasma membrane | 26.65 | 25.83 |
| CDY14989 | Canola | plasma membrane | 28.23 | 25.78 |
| CDX71327 | Canola | plasma membrane | 28.23 | 25.72 |
| CDX90414 | Canola | plasma membrane | 25.33 | 25.6 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 26.12 | 25.38 |
| CDY54350 | Canola | plasma membrane | 22.16 | 25.3 |
| CDX76537 | Canola | plasma membrane | 25.86 | 25.13 |
| CDX75141 | Canola | plasma membrane | 21.9 | 25.0 |
| CDY09527 | Canola | plasma membrane | 20.84 | 24.69 |
| CDY09533 | Canola | plasma membrane | 20.58 | 24.38 |
| CDY02338 | Canola | plasma membrane | 20.58 | 24.38 |
| CDX99493 | Canola | plasma membrane | 25.07 | 24.23 |
| CDX78835 | Canola | plasma membrane | 24.27 | 23.53 |
| CDY08895 | Canola | plasma membrane | 24.27 | 23.29 |
| CDX76540 | Canola | plasma membrane | 24.27 | 23.17 |
| CDX76536 | Canola | plasma membrane | 17.41 | 22.53 |
| CDY64442 | Canola | plasma membrane | 20.84 | 20.2 |
| CDY29403 | Canola | plasma membrane | 19.0 | 18.7 |
| CDY29401 | Canola | plasma membrane | 16.89 | 18.6 |
| CDY39353 | Canola | plasma membrane | 18.73 | 18.59 |
| CDY63252 | Canola | extracellular | 21.11 | 18.52 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 23.48 | 18.5 |
| CDY29404 | Canola | plasma membrane | 18.47 | 18.37 |
| CDY39352 | Canola | plasma membrane | 18.73 | 18.21 |
| CDY53149 | Canola | plasma membrane | 18.73 | 18.07 |
| CDY67986 | Canola | plasma membrane | 17.68 | 17.96 |
| CDY22619 | Canola | plasma membrane | 17.68 | 17.77 |
| CDX99494 | Canola | plasma membrane | 23.75 | 17.54 |
| CDX93469 | Canola | plasma membrane | 17.68 | 17.36 |
| CDX94937 | Canola | plasma membrane | 17.15 | 17.15 |
| CDX96651 | Canola | plasma membrane | 19.0 | 17.02 |
| CDY31805 | Canola | plasma membrane | 19.53 | 16.7 |
| CDX73177 | Canola | plasma membrane | 14.25 | 12.77 |
| CDY63702 | Canola | plasma membrane | 19.0 | 9.39 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.6 | GO:A0A078CHY3 | EnsemblPlants:CDX76826 | ProteinID:CDX76826 | ProteinID:CDX76826.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00127332001 | PFAM:PF16913 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF10 | InterPro:PUP_plant | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0004EE9F5C | SEG:seg | : | : | : |
Description
BnaC08g34120D
Coordinates
chrLK031808:-:1309676..1311396
Molecular Weight (calculated)
41411.3 Da
IEP (calculated)
8.852
GRAVY (calculated)
0.476
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTFKDDDNP ESVRLLMDET TEQRPPAASF SYSNWVSNVK KSTKEAYESK PHSHWILLTL SCTSMLTAFP ASSLLSRLYF SNGGQSKWII SWVAVAGWPI
101: TCLILLPLYI FRKIKPTPLN AKLLLSYTLL GFLSAADNLM YAYAYAYLPA STSSLLASSS LAFSALFGYL IVKNPMNASV INSIVIITGA MAIIALDSSS
201: DRYDYVSNRQ YFAGFFWDIM GSALHGLIFA LSELVFVKLL GRRFFHVALE QQVMVSLVAF AFTTLGMVVS RDLQGMSHEA KSFEGGESRY VQVLVWSAVT
301: FQLGVLGATA VLFLASTVMA GVLNAVRVPI TSVAAVILMH DPMSGFKILS LILTFWGFSS YIYGSSSPTP STQAASSSS
101: TCLILLPLYI FRKIKPTPLN AKLLLSYTLL GFLSAADNLM YAYAYAYLPA STSSLLASSS LAFSALFGYL IVKNPMNASV INSIVIITGA MAIIALDSSS
201: DRYDYVSNRQ YFAGFFWDIM GSALHGLIFA LSELVFVKLL GRRFFHVALE QQVMVSLVAF AFTTLGMVVS RDLQGMSHEA KSFEGGESRY VQVLVWSAVT
301: FQLGVLGATA VLFLASTVMA GVLNAVRVPI TSVAAVILMH DPMSGFKILS LILTFWGFSS YIYGSSSPTP STQAASSSS
001: MTTFKDDNPQ SNLSVRLLMD ETTERPTVSF SYSNWISNIK KSTREAYEAK PFSHWILLFF SGAAMLIAFP ASSLLSRLYF SNGGKSKWII SWVAVAGWPI
101: TCLILLPTYI FQKIKPTPLN TKLVLSYVVL GFLSAADNLM YAYAYAYLPA STSSLLASSS LAFSALFGYL IVKNPLNASV INSIVVITGA MAIIALDSSS
201: DRYSYISNSQ YFAGFFWDIM GSALHGLIFA LSELLFVKLL GRRSFHVALE QQVMVSLTAF AFTTIGMVVS NDFQGMSHEA KSFKGGESLY TQVLVWSAVT
301: FQLGVLGATA VLFLASTVMA GVLNAVRVPI TSVAAVILMH DPMSGFKILS LVLTFWGFSS YIYGSSSSNS STQASSSSS
101: TCLILLPTYI FQKIKPTPLN TKLVLSYVVL GFLSAADNLM YAYAYAYLPA STSSLLASSS LAFSALFGYL IVKNPLNASV INSIVVITGA MAIIALDSSS
201: DRYSYISNSQ YFAGFFWDIM GSALHGLIFA LSELLFVKLL GRRSFHVALE QQVMVSLTAF AFTTIGMVVS NDFQGMSHEA KSFKGGESLY TQVLVWSAVT
301: FQLGVLGATA VLFLASTVMA GVLNAVRVPI TSVAAVILMH DPMSGFKILS LVLTFWGFSS YIYGSSSSNS STQASSSSS
Arabidopsis Description
ATPUP5purine permease 5 [Source:TAIR;Acc:AT2G24220]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.