CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035469.1-P	Field mustard	plasma membrane	98.98	99.23
CDY31805	Canola	plasma membrane	97.71	86.68
AT1G57990.1	Thale cress	plasma membrane	81.68	82.31
AT1G57943.1	Thale cress	plasma membrane	81.68	80.65
AT1G57980.1	Thale cress	plasma membrane	79.39	79.19
CDY22619	Canola	plasma membrane	60.81	63.4
CDX94937	Canola	plasma membrane	59.8	62.01
CDX93469	Canola	plasma membrane	59.8	60.88
CDY64442	Canola	plasma membrane	42.24	42.46
CDY63252	Canola	extracellular	42.24	38.43
CDY29404	Canola	plasma membrane	33.59	34.65
CDY39353	Canola	plasma membrane	33.08	34.03
CDY29401	Canola	plasma membrane	29.52	33.72
CDY67986	Canola	plasma membrane	31.04	32.71
CDY12545	Canola	plasma membrane	24.68	32.55
CDY39352	Canola	plasma membrane	31.55	31.79
CDY29403	Canola	plasma membrane	31.04	31.69
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.92	31.44
CDX96651	Canola	plasma membrane	33.59	31.21
CDY54350	Canola	plasma membrane	23.92	28.31
CDX75141	Canola	plasma membrane	23.41	27.71
CDY01525	Canola	plasma membrane	24.68	25.66
CDX90414	Canola	plasma membrane	24.43	25.6
CDY14989	Canola	plasma membrane	26.97	25.54
CDX76536	Canola	plasma membrane	18.83	25.26
CDX71327	Canola	plasma membrane	26.72	25.24
CDY08899	Canola	cytosol, peroxisome, plasma membrane	24.68	24.87
CDX76537	Canola	plasma membrane	24.68	24.87
CDX78835	Canola	plasma membrane	24.68	24.81
CDX99493	Canola	plasma membrane	24.68	24.74
CDX76538	Canola	plasma membrane	24.43	24.49
CDY08900	Canola	plasma membrane	19.34	24.44
CDY08897	Canola	plasma membrane	23.92	24.04
CDY15687	Canola	plasma membrane	18.32	23.76
CDY08895	Canola	plasma membrane	23.41	23.29
CDX76540	Canola	plasma membrane	23.41	23.17
CDX94594	Canola	extracellular, plasma membrane	20.1	22.64
CDX94595	Canola	plasma membrane	19.85	22.35
CDX78833	Canola	cytosol, extracellular, plasma membrane	26.97	22.04
CDX73177	Canola	plasma membrane	23.66	21.99
CDY17197	Canola	extracellular, plasma membrane	19.59	21.94
CDY27947	Canola	plasma membrane	19.34	21.78
CDY46618	Canola	plasma membrane	12.47	21.59
CDY12422	Canola	plasma membrane	20.61	21.54
CDY29741	Canola	plasma membrane	20.61	21.49
CDY16284	Canola	plasma membrane	20.1	20.95
CDX99494	Canola	plasma membrane	27.23	20.86
CDX90136	Canola	plasma membrane	18.58	20.74
CDY72169	Canola	plasma membrane	13.23	20.55
CDY35722	Canola	plasma membrane	18.32	20.34
CDX90135	Canola	plasma membrane	16.54	20.12
CDY35721	Canola	plasma membrane	15.78	19.44
CDY09527	Canola	plasma membrane	15.78	19.38
CDY09533	Canola	plasma membrane	15.52	19.06
CDY02338	Canola	plasma membrane	15.52	19.06
CDX76826	Canola	cytosol, peroxisome, plasma membrane	18.07	18.73
CDY34789	Canola	cytosol, peroxisome, plasma membrane	17.56	18.21
CDY63702	Canola	plasma membrane	33.84	17.34
CDX96650	Canola	cytosol, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY53149	EnsemblPlantsGene:GSBRNA2T00008684001	GO:A0A078IUP6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF34	PFAM:PF16913	ProteinID:CDY53149	ProteinID:CDY53149.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EEB6B4	UniProt:A0A078IUP6	MapMan:24.2.1.6	:	:	:

Description

BnaAnng12080DBnaAnng12080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUP6]

Coordinates

chrLK033170:-:55467..56904

Molecular Weight (calculated)

44890.9 Da

IEP (calculated)

6.059

GRAVY (calculated)

0.338

Length

393 amino acids

Sequence
(BLAST)

001: MEMSEASKQT TRHEESEHLE NPEPDQILSQ RRSLIVTQRK WWLSVSLCLF LVVLGDSLVM LLLNFFYVQD NREDSDQDLQ YTGTWTQALI QNAAFPILIP
101: LFFIFRSPKQ NPETNNTRFL SFRILFLYMS LGVLVAAHSK LFALGKLYAN YGVFTLISAI QLIFTAIFTA IINRFKFNRW IIISILLTIV IYVFGSPEFG
201: GEPDENEEFY NIQAWLTFAG SVAFALSLCF FQLGFEKLLV KTKRYGNKKV FKMVLEMQIC VSFVASVVCL VGLIASGEYK ELKDDSQRFK KGDTYYVLSL
301: VGLALSWQVW SVGLIGLVLY VSGLFGDVVH MCTSPLVALI VVLAFDFMDD DFSWPRIGAL IGTTLALGSY FYSMHKKNKE MMELDRRENS VEV

Best Arabidopsis Sequence Match ( AT1G57943.1 )
(BLAST)

001: MEMSKASKQT TRHEESEHVQ NPEPDQILSP RRSLELKQRK WWISVSLCLF LVLLGDSLVM LLLNFFYVQM KQDRREEYDQ DLQYKGTWTQ ALIQNAAFPI
101: LIPLFFIFPK PKQHLETNNT SFLSLRLFFL YLSLGVLVAA HSKLFALGKL VSNYGIFSLI STTQLIFTAV LTAIINRFKF TRWIIISILL TIVIYVLGTP
201: DFGGQPHDGE EFGYNIQAWL AFSATIAFSL SLCLIQLGFE KLQVKTKRYG NEKVFRMVLE MQICVAFVAS VVCLVGLFAS DEYKELKGDS KRFKKGETYY
301: VLSLVGLALS WQVWAVGMIG LVHYVSGLFG DVVHMCASPF VALFVVLAFD FMDDVFSWPR IGALIGTVLA LGSYFYTLHK RNKKKMAELN QSENNVEV

Arabidopsis Description

PUP17Probable purine permease 17 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFJ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.