Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18220.1 | CDX95295 | AT2G13650.1 | 15299147 |
| AT4G18220.1 | CDY39936 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76537 | Canola | plasma membrane | 97.44 | 97.44 |
| CDY08900 | Canola | plasma membrane | 71.79 | 90.03 |
| CDY08897 | Canola | plasma membrane | 88.72 | 88.49 |
| CDX76538 | Canola | plasma membrane | 87.95 | 87.5 |
| CDX99493 | Canola | plasma membrane | 85.9 | 85.46 |
| CDX76536 | Canola | plasma membrane | 64.1 | 85.32 |
| CDX78835 | Canola | plasma membrane | 83.85 | 83.63 |
| AT4G18220.1 | Thale cress | plasma membrane | 79.49 | 79.49 |
| AT4G18210.1 | Thale cress | plasma membrane | 78.97 | 78.97 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 53.08 | 55.95 |
| CDY01525 | Canola | plasma membrane | 52.31 | 53.97 |
| KRH45390 | Soybean | plasma membrane | 44.1 | 53.75 |
| CDX90414 | Canola | plasma membrane | 51.54 | 53.6 |
| CDY08895 | Canola | plasma membrane | 52.82 | 52.15 |
| CDX76540 | Canola | plasma membrane | 52.56 | 51.64 |
| KRH46353 | Soybean | plasma membrane | 53.08 | 49.88 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.21 | 49.83 |
| CDY12545 | Canola | plasma membrane | 37.69 | 49.33 |
| KRG98518 | Soybean | plasma membrane | 52.31 | 49.28 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 53.08 | 46.94 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 45.38 | 46.7 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 46.15 | 46.63 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 17.18 | 44.37 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 43.85 | 43.62 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 43.85 | 43.29 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.92 | 42.17 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 41.54 | 41.33 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 40.26 | 40.57 |
| CDY14989 | Canola | plasma membrane | 42.82 | 40.24 |
| CDX71327 | Canola | plasma membrane | 42.56 | 39.9 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 37.95 | 39.47 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 37.95 | 39.26 |
| Solyc02g071100.2.1 | Tomato | nucleus | 37.44 | 38.93 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 47.44 | 38.46 |
| CDY54350 | Canola | plasma membrane | 32.56 | 38.25 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 23.59 | 37.55 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 37.44 | 37.15 |
| CDX75141 | Canola | plasma membrane | 31.54 | 37.05 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 35.9 | 36.94 |
| CDX99494 | Canola | plasma membrane | 47.69 | 36.26 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 35.9 | 33.33 |
| CDY17197 | Canola | extracellular, plasma membrane | 29.74 | 33.05 |
| CDX94594 | Canola | extracellular, plasma membrane | 29.49 | 32.95 |
| CDY15687 | Canola | plasma membrane | 25.38 | 32.67 |
| CDX94595 | Canola | plasma membrane | 29.23 | 32.66 |
| CDX90136 | Canola | plasma membrane | 28.97 | 32.1 |
| CDY27947 | Canola | plasma membrane | 28.72 | 32.09 |
| CDY35722 | Canola | plasma membrane | 28.97 | 31.92 |
| CDY12422 | Canola | plasma membrane | 29.23 | 30.32 |
| CDY16284 | Canola | plasma membrane | 29.23 | 30.24 |
| CDY29741 | Canola | plasma membrane | 28.72 | 29.71 |
| CDY72169 | Canola | plasma membrane | 17.95 | 27.67 |
| CDY29401 | Canola | plasma membrane | 24.36 | 27.62 |
| CDY29404 | Canola | plasma membrane | 26.67 | 27.3 |
| CDY67986 | Canola | plasma membrane | 25.9 | 27.08 |
| CDY39353 | Canola | plasma membrane | 26.41 | 26.96 |
| CDY46618 | Canola | plasma membrane | 15.64 | 26.87 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 25.38 | 26.12 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 25.38 | 26.12 |
| CDY39352 | Canola | plasma membrane | 25.38 | 25.38 |
| CDX90135 | Canola | plasma membrane | 20.77 | 25.08 |
| CDY02338 | Canola | plasma membrane | 20.51 | 25.0 |
| CDY09527 | Canola | plasma membrane | 20.51 | 25.0 |
| CDY29403 | Canola | plasma membrane | 24.62 | 24.94 |
| CDY35721 | Canola | plasma membrane | 20.26 | 24.76 |
| CDY09533 | Canola | plasma membrane | 20.26 | 24.69 |
| CDY53149 | Canola | plasma membrane | 24.87 | 24.68 |
| CDX94937 | Canola | plasma membrane | 23.85 | 24.54 |
| CDY64442 | Canola | plasma membrane | 24.1 | 24.04 |
| CDX96651 | Canola | plasma membrane | 25.9 | 23.88 |
| CDY22619 | Canola | plasma membrane | 22.82 | 23.61 |
| CDX93469 | Canola | plasma membrane | 23.08 | 23.32 |
| CDY31805 | Canola | plasma membrane | 25.13 | 22.12 |
| CDY63252 | Canola | extracellular | 24.1 | 21.76 |
| CDX73177 | Canola | plasma membrane | 18.97 | 17.49 |
| CDY63702 | Canola | plasma membrane | 25.13 | 12.78 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY08899 | EnsemblPlantsGene:GSBRNA2T00000905001 | GO:A0A078F792 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF17 | PFAM:PF16913 | ProteinID:CDY08899 | ProteinID:CDY08899.1 | SEG:seg | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0004EF4689 | UniProt:A0A078F792 | MapMan:24.2.1.6 | : | : |
Description
BnaC08g11290DBnaC08g11290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F792]
Coordinates
chrLK031990:+:352736..355038
Molecular Weight (calculated)
42979.3 Da
IEP (calculated)
9.485
GRAVY (calculated)
0.317
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDQELQVS VQQGKEPNPT VQDERNSVGS NHTNIYKRWL RVIIYTFFVI SGQSVATILG RLYYDNGGNS KWLATVVQLV GFPVLLPYYL FSIKTHTTTH
101: GDDGKAASHR NRVLVYLALG VLVGGDCYLY SIGLLYLPVS TFSLICASQL AFNAFFSYFL NSQKLTPIIL NSLLLLTISS NLLAFNNEES NFKKVTRGQY
201: VTSFICTIGA SAGFGLVLSL QQVAFRKVLK RQTFSEVMDL IIYVSLVASC VSLVGLFSSG EWKTLSSEMD RYKLGKVSYV MNLVWTAVIW QVFNIGGTGL
301: IFELSSLFSN AISALGLPVV PVLAVIIFHD KMNGLKVISM ILAFWGFMSY VYQHYLDDKN LKKSIGIPTS GSSDSPEAKG SGGQKIQTSA
101: GDDGKAASHR NRVLVYLALG VLVGGDCYLY SIGLLYLPVS TFSLICASQL AFNAFFSYFL NSQKLTPIIL NSLLLLTISS NLLAFNNEES NFKKVTRGQY
201: VTSFICTIGA SAGFGLVLSL QQVAFRKVLK RQTFSEVMDL IIYVSLVASC VSLVGLFSSG EWKTLSSEMD RYKLGKVSYV MNLVWTAVIW QVFNIGGTGL
301: IFELSSLFSN AISALGLPVV PVLAVIIFHD KMNGLKVISM ILAFWGFMSY VYQHYLDDKN LKKSIGIPTS GSSDSPEAKG SGGQKIQTSA
001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
Arabidopsis Description
PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.