Factsheet for Solyc02g071050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g074170.2.1
Solyc11g065020.1.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18205.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT4G18205.1	Solyc11g068750.1.1	AT5G22290.1	21798944
AT4G18220.1	Solyc11g065020.1.1	AT2G13650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025125	Potato	plasma membrane	93.8	92.6
Solyc02g071060.2.1	Tomato	plasma membrane	51.68	50.63
CDY08900	Canola	plasma membrane	35.14	43.73
VIT_10s0003g02850.t01	Wine grape	plasma membrane	41.6	43.51
KRH45390	Soybean	plasma membrane	34.37	41.56
AT4G18220.1	Thale cress	plasma membrane	41.86	41.54
CDX78835	Canola	plasma membrane	41.6	41.18
CDX90414	Canola	plasma membrane	39.79	41.07
CDX76537	Canola	plasma membrane	41.34	41.03
AT4G18205.1	Thale cress	plasma membrane	39.79	40.85
Bra013292.1-P	Field mustard	plasma membrane	41.09	40.77
AT4G18210.1	Thale cress	plasma membrane	41.09	40.77
CDX99493	Canola	plasma membrane	41.09	40.56
CDY01525	Canola	plasma membrane	39.53	40.48
CDY08899	Canola	cytosol, peroxisome, plasma membrane	40.57	40.26
Bra021018.1-P	Field mustard	plasma membrane	41.09	39.95
CDY08897	Canola	plasma membrane	40.31	39.9
Solyc02g071110.2.1	Tomato	plasma membrane	39.02	39.84
CDX76536	Canola	plasma membrane	29.97	39.59
Solyc02g071080.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid, vacuole	25.32	39.36
Bra040924.1-P	Field mustard	plasma membrane	39.53	39.13
AT4G18197.1	Thale cress	plasma membrane	39.28	38.97
CDX76538	Canola	plasma membrane	39.28	38.78
Bra013291.1-P	Field mustard	plasma membrane	36.95	38.65
KRG98518	Soybean	plasma membrane	41.09	38.41
KRH46353	Soybean	plasma membrane	41.09	38.31
AT4G18195.1	Thale cress	plasma membrane	38.76	38.07
Solyc08g077370.2.1	Tomato	plasma membrane	32.56	37.72
Bra040925.1-P	Field mustard	plasma membrane	37.73	37.44
Solyc01g088550.2.1	Tomato	plasma membrane	35.14	37.36
CDY08895	Canola	plasma membrane	37.73	36.96
Solyc08g077380.2.1	Tomato	peroxisome, plasma membrane, vacuole	35.92	36.87
CDX76540	Canola	plasma membrane	37.73	36.78
Solyc02g071100.2.1	Tomato	nucleus	34.63	35.73
Solyc03g005810.2.1	Tomato	endoplasmic reticulum, extracellular, plastid	22.48	35.51
VIT_10s0003g02840.t01	Wine grape	plasma membrane	40.05	35.15
Solyc02g071090.2.1	Tomato	plasma membrane	33.33	34.4
Solyc03g005820.2.1	Tomato	plasma membrane	32.3	29.76
Solyc06g035420.1.1	Tomato	extracellular, plasma membrane	22.48	26.44
Solyc07g008440.2.1	Tomato	plasma membrane	24.29	25.61
Solyc10g005160.1.1	Tomato	plasma membrane	23.51	25.49
Solyc12g087870.1.1	Tomato	plasma membrane	22.74	24.72
Solyc10g005150.1.1	Tomato	plasma membrane	24.29	24.61
Solyc12g057090.1.1	Tomato	plasma membrane	18.6	24.24
Solyc07g005660.2.1	Tomato	plasma membrane	20.41	24.09
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	22.48	24.03
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	24.55	23.87
Solyc04g074870.2.1	Tomato	extracellular, plasma membrane	21.45	23.45
Solyc04g074880.2.1	Tomato	plasma membrane	21.19	23.1
Solyc12g087880.1.1	Tomato	extracellular, plasma membrane, vacuole	9.56	21.76
Solyc02g082170.1.1	Tomato	plasma membrane	22.22	20.92

Protein Annotations

EnsemblPlants:Solyc02g071050.2.1	EnsemblPlantsGene:Solyc02g071050.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF17
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002768A37	UniProt:K4B881
MapMan:24.2.1.6	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:40539340..40541387

Molecular Weight (calculated)

43249.4 Da

IEP (calculated)

7.332

GRAVY (calculated)

0.521

Length

387 amino acids

Sequence
(BLAST)

001: MGTVAEKELD IINVQEETDD PKTKKIDALI VIPAESLTTP NSVNKYTKWL EIGIYALIVL VSQTVATILG KLYYNKGGKS TWVISLTETI AFPILLIPMI
101: FNCTNNNNNK IPNLDSKSPS LMTKLFIYVF LGFLVGIGCG LFSIGLLHLP ASTFSLISSS QLAFNVLFSL FMKLEKITPL IANSITLVTI SSLLLAIDSS
201: NNASSYHHNA IGFICTLIAS ALFGLLFSLT DLYFRKFFKK STLREFMDVI ICQSFFATCI ILIGLFASKN WRNLKTEMNN FEVGRLAYIM ILIWISVCWQ
301: LYTYCLLGLI MKVSAVFANV ITTLGAPLIP IMSVIIFNDK MSGVKAISIV LAIWGFSSYA YQQYLDELNH KDDRNEIEDE STDRQTI

Best Arabidopsis Sequence Match ( AT4G18220.1 )
(BLAST)

001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK

Arabidopsis Description

PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.