Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g074170.2.1 | |
| Solyc11g065020.1.1 | |
| Solyc11g068750.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18205.1 | Solyc06g074170.2.1 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | Solyc11g068750.1.1 | AT5G22290.1 | 21798944 |
| AT4G18220.1 | Solyc11g065020.1.1 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025122 | Potato | plasma membrane | 91.73 | 91.25 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 59.73 | 89.96 |
| Solyc02g071100.2.1 | Tomato | nucleus | 88.27 | 88.27 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 43.47 | 43.01 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 40.8 | 41.35 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 39.2 | 40.38 |
| KRH45390 | Soybean | plasma membrane | 34.4 | 40.31 |
| AT4G18220.1 | Thale cress | plasma membrane | 40.0 | 38.46 |
| CDX99493 | Canola | plasma membrane | 40.0 | 38.27 |
| Bra013292.1-P | Field mustard | plasma membrane | 39.73 | 38.21 |
| CDX76537 | Canola | plasma membrane | 39.73 | 38.21 |
| CDX78835 | Canola | plasma membrane | 39.73 | 38.11 |
| Solyc08g077370.2.1 | Tomato | plasma membrane | 33.87 | 38.02 |
| AT4G18210.1 | Thale cress | plasma membrane | 39.47 | 37.95 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 39.47 | 37.95 |
| Solyc08g077380.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 38.13 | 37.93 |
| CDY08897 | Canola | plasma membrane | 39.47 | 37.85 |
| CDY08900 | Canola | plasma membrane | 31.2 | 37.62 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 39.47 | 37.47 |
| Bra040924.1-P | Field mustard | plasma membrane | 38.93 | 37.34 |
| Bra021018.1-P | Field mustard | plasma membrane | 39.47 | 37.19 |
| CDX90414 | Canola | plasma membrane | 37.07 | 37.07 |
| CDX76538 | Canola | plasma membrane | 38.67 | 36.99 |
| KRG98518 | Soybean | plasma membrane | 40.8 | 36.96 |
| AT4G18195.1 | Thale cress | plasma membrane | 38.4 | 36.55 |
| AT4G18205.1 | Thale cress | plasma membrane | 36.53 | 36.34 |
| CDY01525 | Canola | plasma membrane | 36.53 | 36.24 |
| Bra013291.1-P | Field mustard | plasma membrane | 35.73 | 36.22 |
| KRH46353 | Soybean | plasma membrane | 39.47 | 35.66 |
| Bra040925.1-P | Field mustard | plasma membrane | 37.07 | 35.64 |
| CDX76540 | Canola | plasma membrane | 37.6 | 35.52 |
| CDY08895 | Canola | plasma membrane | 37.33 | 35.44 |
| AT4G18197.1 | Thale cress | plasma membrane | 36.27 | 34.87 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 40.53 | 34.47 |
| CDX76536 | Canola | plasma membrane | 26.67 | 34.13 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 34.4 | 33.33 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 36.0 | 32.14 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 20.53 | 31.43 |
| Solyc12g057090.1.1 | Tomato | plasma membrane | 23.2 | 29.29 |
| Solyc12g057100.1.1 | Tomato | cytosol, golgi, plasma membrane | 27.73 | 28.73 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 25.6 | 26.89 |
| Solyc04g074870.2.1 | Tomato | extracellular, plasma membrane | 24.27 | 25.71 |
| Solyc06g035420.1.1 | Tomato | extracellular, plasma membrane | 22.13 | 25.23 |
| Solyc12g087870.1.1 | Tomato | plasma membrane | 23.2 | 24.44 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 25.87 | 24.37 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 24.8 | 24.35 |
| Solyc07g008440.2.1 | Tomato | plasma membrane | 23.73 | 24.25 |
| Solyc12g087880.1.1 | Tomato | extracellular, plasma membrane, vacuole | 10.93 | 24.12 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 25.33 | 23.11 |
| Solyc04g074880.2.1 | Tomato | plasma membrane | 21.87 | 23.1 |
| Solyc07g005660.2.1 | Tomato | plasma membrane | 20.0 | 22.87 |
Protein Annotations
| EnsemblPlants:Solyc02g071090.2.1 | EnsemblPlantsGene:Solyc02g071090.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF17 |
| PFAM:PF16913 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002768BF5 | UniProt:K4B885 |
| MapMan:24.2.1.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:40577052..40579474
Molecular Weight (calculated)
41385.8 Da
IEP (calculated)
6.363
GRAVY (calculated)
0.299
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAHEKLLN LTVEEAEGTE SSENAKTSRL QSSKFILWLQ IFIFTFFTLG GQAAGTLLGR VYYEQGGQTR WIATLAQTAG FSILLPFICY PSPKNHNEDE
101: RTIHHPSIFV RASVYIFLGL FQVVNSMSFT VGVQYLPAST YSLISGSQLA FNAITSYLLN GQKITAIILN SVVLLSFSSS AVIFQNETGD SGEISQKSLL
201: IGFAATTFGS LGYALQFSLT ELAFQKVFKS NTLKQVMKMS FFIGFFVTIA SLTGLFVSGN WRDLGKEMGE YRTGKSSYVL NLVCSAIAWQ LYALGSVGLV
301: FKASSLFSNV IINLGTSIVP IFAMLFLKDR MNGLKVFSLL LGLWGYASYI YQHYLDDLEA KTSEVKSSDD QDDDF
101: RTIHHPSIFV RASVYIFLGL FQVVNSMSFT VGVQYLPAST YSLISGSQLA FNAITSYLLN GQKITAIILN SVVLLSFSSS AVIFQNETGD SGEISQKSLL
201: IGFAATTFGS LGYALQFSLT ELAFQKVFKS NTLKQVMKMS FFIGFFVTIA SLTGLFVSGN WRDLGKEMGE YRTGKSSYVL NLVCSAIAWQ LYALGSVGLV
301: FKASSLFSNV IINLGTSIVP IFAMLFLKDR MNGLKVFSLL LGLWGYASYI YQHYLDDLEA KTSEVKSSDD QDDDF
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.